Microarray Probes on PGSC0003DMT400030402
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47116_PI426222305 |
JHI_St_60k_v1 |
GTGTGTGTGTTTTAAGTGTGGAAAATGCCTATTTTGAGTTTGAGACGTGTGATTTTGTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030402
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030402 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G05340.1 |
+1 |
1e-166 |
474 |
234/298 (79%) |
Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324 |
Transcript Sequence (1251 bp)
>PGSC0003DMT400030402 1251 pgsc_dm_v3.4
CTTTATTCTTCTCTATTTTTATTATATTTTCCACTCTCTAAATATTAGTCAACTTTTGTA
ATGGCTTCTTCAAAAAATAATACTATGGTTTTTTTATTTTTGCTTGTGACCTTACTAATT
GGAAGTTCATCAGCACAACTTTCAACTAGTTTTTACTCAAAATCATGTCCTAAGCTTTAT
CAAACTGTGAAATCAACAGTGCAATCAGCTATCAAAAAAGAAACCCGAATGGGCGCTTCG
CTTCTTAGGCTTTTCTTCCATGATTGCTTCGTTAACGGATGTGATGGATCACTACTCCTT
GATGACACATCAAGCTTTACTGGAGAAAAAAGGGCTGCTCCAAATGTGAATTCTGTAAGA
GGATTTGAAGTCATTGACAACATCAAATCTGCTGTAGAAAAAGCATGCCCCGGCGTTGTT
TCTTGTGCTGATATTTTAGCTGTTACGGCTCGTGATTCTGTTGTCATTCTTGGAGGGCCT
AATTGGAATGTAAAATTGGGCAGAAGAGATGCCAGGACTGCAAGCCAAGGTGCTGCCAAC
AGCAGCATTCCAGCTCCTACTTTTAACCTAAATAGACTCATCTCAAGTTTTAGTGCTGTT
GGCCTTTCTACCAAGGATATGGTTGCCTTATCTGGTTCTCACACAATTGGACAAGCAAGA
TGCACAACATTTAGGGCACGTATATACAATGAGACCAACAGCATAGATTCATCATTTGCA
AGAACAAGGCAAAATAGTTGTCCAAGAAACTCAGGCTCAGGTGACAACAACTTAGCGCCT
CTAGATCTTCAAACACCTTCGAAATTCGATAACAATTACTTCAAGAATCTTGTGAATAAA
AAGGGTCTTCTACATTCCGATCAACAATTATTCAATGGGGGATCTGCTGATTCGATCGTT
AGGTCTTACATCAATAATCCTAGTAGTTTCAACTCTGATTTTGTGACTGCTATGATCAAG
ATGGGCGATATTCGTCCACTTACTGGATCGAATGGTGAAATTAGGAAGAACTGCCGTAGA
AGAAATTAAGTGTTGAATATTGGTATTAAGTGTGTGTGTGTGTGTGTTTTAAGTGTGGAA
AATGCCTATTTTGAGTTTGAGACGTGTGATTTTGTTTTACTCTATAGTTTAATTAGTCAA
AGTTTTCTTTCTTAATATGATGATAGTTCAATGTGTGTTAAAGGCGTAAAGCATTTTGTA
TTTGTATCACTATTGGAATATTATGAATAACTTAAACACACTTTTTGTTAG
