Microarray Probes on PGSC0003DMT400030047
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37185_PI426222305 |
JHI_St_60k_v1 |
TCTCCATTTATTGCATGGGCGGATTAGGCAAGACCACTCTTGCAAGAAACCTCTACAGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400030047
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400030047 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G46730.1 |
+1 |
1e-113 |
367 |
290/866 (33%) |
NB-ARC domain-containing disease resistance protein | chr3:17213069-17215612 REVERSE LENGTH=847 |
Transcript Sequence (2328 bp)
>PGSC0003DMT400030047 2328 pgsc_dm_v3.4
ATGGCTGATGCCTTTGTGTCATTTGCAGTTCAAAAATTGGGTGATTTCCTTATACAACAA
GTTTCCCTGAGATCAAATCTGAGAGATGAAGTTAGATGGCTGAGAAATGAGCTATTCTTC
ATACAGTCTTTCCTCAGAGATGCAGAACAAAAGCAATGCGTTGATCAAAGAGTTCAACAA
TGGGTGTTTGAAATCAACTCTATTGCTAATGACGCTGTTGCTATACTCGAGACTTATAGC
TTCGAGGCTGGTAAAGGTGCTAGTCGTTTCAAGGCTTGCGCTTGCATCTGTAAGAAGGAG
AAGAAATTCTACAATGTCGCCAAGGAGATTCAATCACTCAAGAAACGAATCATGGATATC
ATTCGCAAGAGAGAGACTTATGGTATTACAAATATCAATAGTAATGCTGGAGAAGGGACA
AGTAATCAGGTTACAACATTGAGGAGAACTAACTCATCTGTGGATGACCAGGATTACATT
TTTGTTGGCTTTCAGGATGTTGTACAAACATTGCTAGCTGAACTTCTCAAAGTAGAGCCT
CGTCGAAGCGTCCTCTCCATTTATTGCATGGGCGGATTAGGCAAGACCACTCTTGCAAGA
AACCTCTACAGAAGTCGCACCAAGGAAACTCTAGATTTGTTGGAAAGGATGACGGAAAGA
GATCTAGAAATTTACCATCATGATCTATTGAAAGAATGCAAATACCTTGTGGTGGTTGAT
GATGTATGGCAGAGAGAAGCATGGGAGAGTTTGAAAAGAGCATTCCCGGATAGCAAGAAT
GGCAGCAGAGTTATTATTACCACGTGGAAAGTGGATGTCGCTGAAAGAGCAGACGACAGA
GGTTTTGTCCATAAACTTCGTTTCCTAAGCCCAGAAGAAAGTTGGGATCTCTTTTGTAGG
AAACTGCTTGATGTTGGAGCAATGGTTCCAGAAATGGAAAGTCTAGCTAAGGATATGGTG
GAGAAGTGTAGAGGCTTAGCTCTTGCAATTGTTGTATTGAGCGGACTACTTTCGCATAAA
AAGGGGCTAGACGAATGGAAAAAGTGTTTTTTGTACTTCAGTATTTTTCCAGAAGATAAA
GTGCTCGAGGCAGAAAACATAATATGGTTGTGGATGGCTGAGGGTTTCATACCAAGGGGA
GAAGAAAGAATGGAGGATGTCGCAGAAGGCTTCTTGAATGAGCTGATAAGACGAAGCTTG
GTTCAAGTAGCTAAAACATTTTGGGAAAAAGTTACTGAATGTAGGGTTCATGATTTACTT
CGTGATCTTGCGATACAAAAGGCATTGGAGGTAAACTTCTTTGACATTTATGATACAAGA
TACCACTCCATATCCTCCTCATGTATCAGACATGCCATTCATAGTCAAGGAGAAAGGTAC
CTCTCACTTGATCTTTCTAACTTGAAATTGAGGTCAATTATGGTCTTTGATCACAATTTT
TCTAACACAAGTCTTATAAAGTTCAGTAGTGTGTTCCGACATTTATATGTGTTGTACTTG
GATATTGAAGTTGGTTTTACACCTGGTGCCATAGGAAGTTTGTACCACCTTAAATTCTTA
CACTTGAGAGGTGTCTGTTATATTCCCTCTTCCATTGGCAACCTCAAGAATTTACAGACA
CTTCATGCCAATAGTAACTTTTTCTCATGCCACCTACCCCCCGAAACAGCTGACCTAATA
AATCTAAGACATTTAGTTGCTCCGTATTCAAAACCTCTGAAACGTATAAGCAAACTCACA
AGTCTTCAAGTTCTTAAAGACATTTATTGTGATCAGTGGAAAGATGTTGACCCTGTTGAT
TTAGTCAATCTTCGAGAATTAAGCATGACTAATATTACCAGATTTTACTCCTTAAACAAC
ATTAGCAAATTGAAAAACCTTAGCACTCTCAGATTGTTGTGTCCTGGTGATGGACCATTC
CCATCTCTTGAATTTGTTAATTGTTGTGTAAAGCTCCAGAAATTGTTCTTAAATGGGAGA
ATAGAGAAACTGCCTGATATGTTTTCAAATTCCATCACAATGATGATTCTTCAGTACTCA
CAACTGATAGAAGATCCGATGCCTAATTTGGGAATGTTGCCAAACCTAAGGGATCTCCAA
TTGAGAGGAGCTTATAAAGGAAAAGATATAACCTGCAATGATAACAGCTTCAGTCAACTA
GAGTTCCTTCGTCTTGATAGTCTTGGGAGGCTAGAAAGATGGCATTTAGGCACAAGTGCG
ATGCCTCTGATTAAAGGTCTTTATATCTATGATTGTGAAAGGCTGAAGGAGATTCCAGAG
AGAATGAAAGACGTGGTGAAGTTTTCCAAGCCTATATATGGGCGATAA
