Microarray Probes on PGSC0003DMT400029426
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8548_PI426222305 |
JHI_St_60k_v1 |
GGGACTGTCGGGATATTCTGGGTAATATAATGAAAAAGTGGCATATTTCCAAGATTTTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400029426
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400029426 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G49120.1 |
+1 |
2e-23 |
95 |
51/115 (44%) |
Protein of unknown function (DUF581) | chr5:19908800-19909332 REVERSE LENGTH=150 |
Transcript Sequence (1032 bp)
>PGSC0003DMT400029426 1032 pgsc_dm_v3.4
AAGATTTTTAAAAAAATGGAAAATAGGAGGTTAGAGTTAAAAGATAAAGAGTCCAAAATA
GGTTAAACGTGGCATTCAACTAAGCATTCCAAGTTTAGATCATTCGCTATGCTACTCGTC
CTTTCTTACTGCCCATTTTTCCCTGCTGTATAGTATTAGGGGTACCCCCTTTTACCCCCC
CTTACTAACTTCTTCTTCTTCTTCTTCGCAGCTCCTATTTAGCAACAAATCTTTCAAGGG
TTTTTCAGATAAACAAAAATCTCTTTCCCTCATGAGATGGTGGGACTCAGTGTAGTACTC
GAAGGTTACAATAATAAAGATATTAATACAACTACTTCTACTTGGCAAATTCTTAACAAA
GCTAGTATGGTATTGATGAAACCCACTTCTCCCTCCTCGATCCCTTTTTCCCCGCGAAAA
TCTCCGGCAGCTTCTGGATTTCTCGATTCCTGTTTCCTTTGTAAGCAGAAACTCTTACCT
GGCAAAGACATCTACATGTACAAGGGAGAATGGGCATTTTGTAGCGTAGAGTGCAGATGC
AAGCAGATTTTTATGGATGAAGAAGACAGTATAAAGACGAAATCTCAAGCTTCGAATTCT
TCTTCTTCTAATAAATCGTGTACTTCCTCTTCTTCATCATCATCGTCGTCTTCTTCCCGG
AGTAGAAAAACGGCGGCGAGGAACCGACCCAATGGGTTTGCATACTGAGAAAGGAGTTCA
GTTCCACGAAAAATTTGCTGCTTTCCAGTTTTGTCCTCGATACATTTTGTAATGACTATG
CTAGCCCTTTCAATTTTATTTTATTACCGTAGTAGTTTTATTTTATGAAATTAATATTAG
TAGTACGAAAATTTGGAAACAAACAAAACTGCTGCTAGTTTTCATTTATCAGCCCCTGGG
TTTTGGTTTCCCGTTGCCAATTTAACTAAATTGCAAAATAATGTTATTGAGAATCTTTCT
TTTTCTAGAATGGGGTTTTGTAGGGACTGTCGGGATATTCTGGGTAATATAATGAAAAAG
TGGCATATTTCC
