Microarray Probes on PGSC0003DMT400029078

Probe IDChipProbe Sequence
CUST_10358_PI426222305 JHI_St_60k_v1 GCGTTTGGCTGTTTGTCTAGATCCTGATCACATGCCACTATTTGAAAAGTATTTGTATGA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400029078

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400029078 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT5G48930.1 +2 1e-117 351 167/297 (56%) hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | chr5:19836654-19838092 REVERSE LENGTH=433

Transcript Sequence (1061 bp)

>PGSC0003DMT400029078 1061 pgsc_dm_v3.4
ATATTTATAGGTTACTCGTTTCAAGTGTGGTGGAATCGCTCTTGGTGGTGGAGTATTCCA
CACGTTATCCGATGGTCTCTCATCCCTCCACTTCATCAACACGTGGTCGGACATCGCCCG
TGGCCTCTCCGTCGCAGTCCCCCCATTCATCGACCGGACGCTCCTCCATGCACGGGACCC
ACCAACATCTTCTTTCGAGCATGTTGAGTATCATCCCCCACCTACCCTCATCTCATCAAA
AAAAGGTGAGTCCACAGGCCCAAAGTCTAGTACCACGGCCATGTTGAAATTCTCAAGTGA
ACAAGTCGGACTTCTTAAGTCTAAGTCCGAAAACGAGGGCAGCACTTATGAAATCCTCGC
GGCCCATATTTGGCGATGCACGAGCAAGGCACGTGGATTGGCAGATGATCAATTGACCAA
ATTACATGTGGCCACTGACGGTAGGTCAAGGCTTTGCCCTCCCTTGCCACCGGGTTACCT
AGGAAATGTGGTGTTCACGGCCACACCAATAGCTAAATCATGTGAACTTCAATCAGAGCC
GTTGAGGAATTCCGTTAAGAGAATTCACAATGAGTTGATCAAAATGGACGATAATTACCT
AAGATCAGCGTTGGATTACCTCGAATTACAACCTGATTTATCGACCCTAATCCGGGGCCC
GACTTACTTTACTAGCCCTAACCTCAATATTAATAGTTGGACTAGGTTGCCTGTCCATGA
GTGTGATTTTGGATGGGGTAGGCCAATTCATATGGGACCAGCTTGCATTTTATATGAAGG
GACAATATATATTATACCAAGTCCAAATACAAAAGATAGGAACTTGCGTTTGGCTGTTTG
TCTAGATCCTGATCACATGCCACTATTTGAAAAGTATTTGTATGAATTTTGAGATATTTT
TCATATGGAAAAAAGTCAAGAATGTACAACACAAATTGTGGTGTGATTTAGTTCAAGTCC
TTTTTTTTTTAGTTTTGAGATATTTTCCAAATTCTTTATTAGGAATTTGATTGTGTAATT
GATAATGTCTTATTAAGCTAAATCTCCATATTTCCTTTGTG