Microarray Probes on PGSC0003DMT400027932
Probe ID | Chip | Probe Sequence |
---|
CUST_35309_PI426222305 |
JHI_St_60k_v1 |
AGGAGGCCATTTGGATTATGTGTATCTAACGTGTAAAGTGCACTTTTTAGTTTGTGCTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027932
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027932 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G17500.1 |
+2 |
3e-56 |
187 |
109/174 (63%) |
ethylene responsive element binding factor 1 | chr4:9759405-9760211 FORWARD LENGTH=268 |
Transcript Sequence (1022 bp)
>PGSC0003DMT400027932 1022 pgsc_dm_v3.4
AATTCACAAATCTTTTCTCTTTACCTTACACATACAAAACCTTCAAAAACTCATAATGTA
TCAATTACCCATTTCTACAGAGTTACCTCCGACTTTTTTTCCGGCAGAATTCCCGGTGTA
TTGCCGGAGTTCAAGTTTCAGTAGTCTCATGCCATGTTTAACCGAATCATGGGGTGACTT
GCCGTTAAAAGTTAACGATTCCGAAGATATGGTAATTTATGGGCTTCTACAAGACGCCTT
CAGTATCGGATGGACGCCGTCAAATTTAACGTCCTCGGAAGTGAAACCAGAGCCGAGGGA
GGAGATTGAGCCAGTTATGAGTACTTCTGTTTCTCCGCCGACAGAGACTGCGGCGGCTCC
AGCGGCTCTGCAGCCTAAAGGAAGGCATTACAGGGGAGTTAGACAAAGGCCATGGGGAAA
ATTTGCGGCGGAAATAAGAGATCCGGCTAAAAACGGCGCACGGGTTTGGCTTGGAACTTA
CGAGTCGGCTGAGGAAGCCGCGCTCGCTTATGATAAAGCAGCTTTTAGGATGCGCGGTAC
TAAGGCTCTATTGAATTTCCCGCATAGAATCGGTTTAAATGAGCCGGAGCCGGTTAGAGT
GACGGTTAAGAGACGATTACCTGAACCGGCTAGTTCGTCGGTATCATCAGCTTCGGAAAG
TGGCTCGCCAAAGAGAAGGAGAAAAGGTGTAGCGGCAAAGCAAGCCGAATTAGAAGTTCA
GAGCCGGGGACCAAATGTTATTCAAGTTGGTTGCCAAATGGAACAATTTCCAGTTGGCGA
GCAGCTATTGGTTAATTAAAATATGGAGCTAAGAACTCAACGGCAAGGGCTTGTTTGGCT
TTGAAGTGGACAGAAAATAGCAAATCATTCCAATTGGTGAGAAGTGGACCAAGGAGGCCA
TTTGGATTATGTGTATCTAACGTGTAAAGTGCACTTTTTAGTTTGTGCTTTAATGAAAAA
AAAAGTGGCTTTTGATTTTATTGAATGAATAATATTCTCTTTATCCCTATAATTGAGTTA
GG