Microarray Probes on PGSC0003DMT400027932

Probe IDChipProbe Sequence
CUST_35309_PI426222305 JHI_St_60k_v1 AGGAGGCCATTTGGATTATGTGTATCTAACGTGTAAAGTGCACTTTTTAGTTTGTGCTTT

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027932

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400027932 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT4G17500.1 +2 3e-56 187 109/174 (63%) ethylene responsive element binding factor 1 | chr4:9759405-9760211 FORWARD LENGTH=268

Transcript Sequence (1022 bp)

>PGSC0003DMT400027932 1022 pgsc_dm_v3.4
AATTCACAAATCTTTTCTCTTTACCTTACACATACAAAACCTTCAAAAACTCATAATGTA
TCAATTACCCATTTCTACAGAGTTACCTCCGACTTTTTTTCCGGCAGAATTCCCGGTGTA
TTGCCGGAGTTCAAGTTTCAGTAGTCTCATGCCATGTTTAACCGAATCATGGGGTGACTT
GCCGTTAAAAGTTAACGATTCCGAAGATATGGTAATTTATGGGCTTCTACAAGACGCCTT
CAGTATCGGATGGACGCCGTCAAATTTAACGTCCTCGGAAGTGAAACCAGAGCCGAGGGA
GGAGATTGAGCCAGTTATGAGTACTTCTGTTTCTCCGCCGACAGAGACTGCGGCGGCTCC
AGCGGCTCTGCAGCCTAAAGGAAGGCATTACAGGGGAGTTAGACAAAGGCCATGGGGAAA
ATTTGCGGCGGAAATAAGAGATCCGGCTAAAAACGGCGCACGGGTTTGGCTTGGAACTTA
CGAGTCGGCTGAGGAAGCCGCGCTCGCTTATGATAAAGCAGCTTTTAGGATGCGCGGTAC
TAAGGCTCTATTGAATTTCCCGCATAGAATCGGTTTAAATGAGCCGGAGCCGGTTAGAGT
GACGGTTAAGAGACGATTACCTGAACCGGCTAGTTCGTCGGTATCATCAGCTTCGGAAAG
TGGCTCGCCAAAGAGAAGGAGAAAAGGTGTAGCGGCAAAGCAAGCCGAATTAGAAGTTCA
GAGCCGGGGACCAAATGTTATTCAAGTTGGTTGCCAAATGGAACAATTTCCAGTTGGCGA
GCAGCTATTGGTTAATTAAAATATGGAGCTAAGAACTCAACGGCAAGGGCTTGTTTGGCT
TTGAAGTGGACAGAAAATAGCAAATCATTCCAATTGGTGAGAAGTGGACCAAGGAGGCCA
TTTGGATTATGTGTATCTAACGTGTAAAGTGCACTTTTTAGTTTGTGCTTTAATGAAAAA
AAAAGTGGCTTTTGATTTTATTGAATGAATAATATTCTCTTTATCCCTATAATTGAGTTA
GG