Microarray Probes on PGSC0003DMT400027849
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50788_PI426222305 |
JHI_St_60k_v1 |
GCAGCGATGCACGCTATAATCTTGTGTAAAAAGATTGCTTAGGATACTTAGTATGTTTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027849
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027849 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G23240.1 |
+1 |
5e-27 |
107 |
69/118 (58%) |
ethylene response factor 1 | chr3:8295705-8296361 FORWARD LENGTH=218 |
Transcript Sequence (981 bp)
>PGSC0003DMT400027849 981 pgsc_dm_v3.4
TTCCTCTTTCTCCACGAGATAAATAAAATTCATAAAAATCCCACGATTAAACGATTACTT
TTCTAGTATCCCTTTATGTTAAATACCTCATAAAACTAAACATTTTCCCCAACAAATTAA
CCAAAATCCCTTCTAATTATAGCTATGGTTCCAACTCCTCAAAGTGATCTACCTCTTAAT
GAGAATGACTCACAAGAGATGGTATTATATGAAGTTCTTAATGAAGCTAATGCTCTAAAC
ATCCCTTATTTACCCCAAAGAAATCAATTACTTCCAAGAAATACTAATAATCTTCGTCCG
TCACAGTGCATAGGCAAGAAATACAGAGGCGTACGACGTCGTCCGTGGGGAAAATACGCT
GCCGAAATTCGCGATTCGGCTAGACACGGTGCGAGAGTATGGCTAGGTACGTTTGAAACT
GCTGAAGAAGCTGCGTTAGCTTATGATAGGGCGGCTTTTAGAATGCGAGGTGCTAAGGCA
CTACTTAATTTTCCATCTGAAATAGTGACTGCCTCTGTTTCAGTAGAAAAATTAAGTTTG
TGCTCAAATAGTTACACTACCAATAATAATTCAAATTCAAGTTCGAATGAAGTTTCAAGT
GGAACGAGTGATGCATTTGAATCAAAAATTTCCAAGGAGTTTTCTCAAGATGTTAAAACA
GAGCTGTGCATGGAGAATTTCTTGGTGCTCTAAGCGAATAATGTGTTGGCAAGTAGGGAA
TATCTCTATCTATGTATTCAGGTGTACGAATCAATTGAACTACTAAAATTTCGCTGTTGT
ACTTATATTATGGGCTTCTCTATTCTCTTATTTCCTTTTTTGAATTGTTTGCAGCGATGC
ACGCTATAATCTTGTGTAAAAAGATTGCTTAGGATACTTAGTATGTTTATAAGTTGTAAT
AGACACATTCTATTTTCTAGTTTTTTTTCTTCTCAAAATTCAAATCAAACGGAATATTAT
ATGTATACCCAAATCTTTTTT
