Microarray Probes on PGSC0003DMT400027833
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50798_PI426222305 |
JHI_St_60k_v1 |
GGAAGAAAGCATGGGGAATTTAGAAAAGATTGCACTATGCATCATATGTGATTTTTGTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027833
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027833 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G34060.1 |
+2 |
1e-37 |
140 |
65/103 (63%) |
Peroxidase superfamily protein | chr2:14384914-14386530 FORWARD LENGTH=346 |
Transcript Sequence (1110 bp)
>PGSC0003DMT400027833 1110 pgsc_dm_v3.4
ACTACCCTTTTGATGCTTCTTTCCCTTGCGGTTCTTCTTTCCTCCCTCTAAACGGACGTT
GGTGGTGCTAGCGGTGTTCATGTCTCCTTCAGTTGCCATTCCCTTAGTGCAAACCTTCGC
TTTGATACCACGTTATCACGGACTTAGAGTCTTACTAATGCTCCGTGCGGCACTTGACAA
CTTACTCACGAATCTTTCACGATCTTGTAAGCTCAAGTAAGCCTTTACGACTAAGATCGC
TAAGAGAATGAAAAAGGAAGACTTAGAGAATTTTGGAAGAAGGCTTTTTATATTAAGCTT
TGGAGAATGCTTTACAAGTTTGCTTACAACTTGGTTGGATGGATGGTTGGATGGATGGAT
GCCTTGCAAATGAATGGCACCACCTATTTATCCTAAATCCTAAGGACTAAAGTGCAAATA
AAAATTACTTACAAGTCCCTAAGATATTTACACAAAAGCCCCTCTTCTAGAATTCTCTAC
ACACTCTAGAGAATTCTAAGGCTTTCTTTGGAAACTATCTAAATTATTCTAGAGAATTCT
AAGGAATTCTCTAGCCTTCTTGAATAATCTAGAGGGTTCTACAGTCTTCCGGAAACCTCT
CCACAACTCTAGTCCCTTCCGCCCCTATCCGGACGCAAAATTTCACTGTGATGTGGCGGG
ACGTGACACTAGGCTTTTCAAGGCCCTAAAAATGTCATGTCCACAATTTGGTGGAAATGT
TGATATTGTAGCACCATTTGATGTGACAACACCCTTCTCATTTGACAATGCTTATTATGG
GAACTTAGAGGCTAAATTGGGATTATTGGCTTCTGATCAAGCTTTATCTTTGGACCCAAG
GACTAAGCCATTGGTTCAAGAATTGGCTAAGGATAAACATAAGTTTTTTCAAGCTTTTGC
TGATGCTATGGAGAAAATGGGAAGTATTGGGGTCAAAAGGGGAAGAAAGCATGGGGAATT
TAGAAAAGATTGCACTATGCATCATATGTGATTTTTGTGTTATTGGATATTTGATTTTTC
ACCTAATTATTTATTTTTATTATTATTTGATTATTTCTTCTAATTTTGTTGAAGGAATCT
TGTACTGCTTGAACACATCTATGATATCTC
