Microarray Probes on PGSC0003DMT400027659
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8549_PI426222305 |
JHI_St_60k_v1 |
GAAACCGTAATATCGCTATAGTAATGAATAGGTAGTAGCTGAAAGTTGCAATCATTCAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027659
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027659 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G18670.1 |
+3 |
0.0 |
579 |
297/524 (57%) |
beta-amylase 3 | chr5:6226138-6227999 FORWARD LENGTH=536 |
Transcript Sequence (1944 bp)
>PGSC0003DMT400027659 1944 pgsc_dm_v3.4
CTTTGTTCAAATTTTTAGCTCTAAATCCTTCATTTTACCAAATTAGTTGAAATTCCCCTC
TGCTGATTGTCAAGAATTTGTTTGTCTGACAAAAGGCCCAATTTTTCTGGTTATATCATT
AATTTCAGATTCAAAGGAAAATTATGGAGGTTTCAGTGATGGGAAGTTCTCAGGTGAATT
TGGGTAGGAATGATTTGGTATGTAGAGAAGTTGGAAATTGTAGTTTTACAAAGAGTTTCA
ATTCAAACATCTCCTCTTCTTCTTCTTCTTCTTCTTTGAAAAGTTCAAAATTATGTATAA
AATTGCGTTCCAAGTCTTTGAATAGGTTTAGTTTGAAAGCATCTGCTTGTTCACAACCTG
AACCACTCATATCGAAGAATAACAGAAAAACTAAGACGACTGATGGTGTGAAACTATTTG
TTGGGTTACCACTTGATACTGTTTCAAGTACTAATACAATAAACCATGCTAGAGCAATTG
CAGTTGGATTAAAAGCATTGAAGTTACTAGGTGTTGATGGCATAGAACTACCAGTCTGGT
GGGGAGTTGTTGAGAAGGAAACCAGGGGAAAGTATGACTGGACAGGCTACCTTGCACTTA
CTGAAATAATCCAAAAGTTGGGACTTAAGCTTCATGTGTCACTTTGCTTCCATGCATCAG
GGGAAGCCAAAATTCAACTCCCAGAATGGGTTTCTCAGATTGGTGAATCTGATCCTAGTA
TCTTCTTCAAGGACCAATCAGGACAACACTATAAAGATTCTCTTTCGTTTGCTGTTACTG
ATGTTCCTGTCCTTGATGGAAAGACTCCGGTTCAAGTCTACAAAGAGTTCTGTGAGAGCT
TCAAGACTGCATTTTCACCGTTCATGGGCTCCACAATCACGGGCGTTTCTGTTGGTCTAG
GACCAGAAGGCGAGCTTCGCTATCCTTCTCATCACAATCCATCCAAAATGAACAATTATC
AAGGAGCTGGTGAGTTCCAGTGTTATGATAAATACATGCTGAGTTCTCTCAAACAGTATG
CCGAAAGCAACGGGAATCCTCTGTGGGGATTGGGTGGTCCGCACGATGCCCCTGGTTATG
ATCAACCACCCATGACAAGCACCTTCTTCAAGGAGAATGAAGGATCTTGGGAGACGACTT
ATGGTAACTTTTTCCTTTCTTGGTACTCGGAGCAGCTCATTTCACATGGAAGCCGACTTC
TTTCGCTTGCCTCTGAAACATTCCATGATGTTCCAATCTCCATTTGTGGCAAAGTTCCCC
TTGTGCATTCTTGGTATAAAACCCGATCCCATCCTAGCGAGCTAACAGCCGGTTTCTATA
ACACAGCCAACAGAGATGGTTATGTAGAAGTCGTTGAGATGTTTGCAAAGCATTCGTGCC
AAATTATCTTGCCTGGGATGGATCTCTCGGACAATCTCCAGCCAAACAAATCTCTCTCAA
GCCCAGAGTTGTTGGTTGCTCAAATTACATCATCTTGTAGAAAGCAGGGAGTGGAAATCT
TGGGGCAAAACTCAATGGTTGCAAATACACCAAATGGTTTCGAACAGATAAAGAAGAAGT
TGTCAAGTGAAAAGGAAATGAGCTTGTTCACATATCAAAGAATGGGTGCGGACTTCTTTT
CTCCTGAACATTTCCCTGCATTCACTCAATTCGTTCGGAACCTTAATCAACCAGAACTGG
ATTCGGATGATCAACCAACAAAACAAGAAGAACGTGTTGCCAGTAATCATCTCCAGATGC
AAGCAGCTTAGATTCAGATTCTATGTACATATTGGTAATCATCTTAGAAACCGTAATATC
GCTATAGTAATGAATAGGTAGTAGCTGAAAGTTGCAATCATTCAGTTTTTCTGTTATATA
TATATATGTATTGTTATAGTATGAGAAAGTTTGTTGGCTTGAATTATGAAGATAGCTTTC
AAATATATTTCTTCTTTGGTTGCA
