Microarray Probes on PGSC0003DMT400027594
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45278_PI426222305 |
JHI_St_60k_v1 |
CACTAGTGATACTGGACCTTATTGGGAATCACCAAGAAAATTGGTTGATGAAAAGTATAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027594
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027594 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G41380.1 |
+3 |
2e-113 |
333 |
162/264 (61%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr2:17251981-17252886 FORWARD LENGTH=269 |
Transcript Sequence (995 bp)
>PGSC0003DMT400027594 995 pgsc_dm_v3.4
GCATATATTAAAGGGATCAATGGTTTAAAATAAATGTTGTTCATCATTAACTAAAAAAAA
GAATGGCAAATTTGTTCATTAAGCAAGCACAACAATACTCAAAGGGTAGGCCAAGTTACC
CTCAAGAATTGTTCAATTTCATTGCTTCTAAAACACCTTCCCATGATCTTGTCTGGGATG
TTGGTACTGGTAGTGGCCAGGCTGCTCAATCTTTGGCTAAGCTTTACAAGTATGTGATAG
CTACAGACACAAGTCCAAAGCAGCTTGAATTTGCAGCAAAGGTTCCGAATGTTCGATACA
TATGTACCTCTCCTAAGATGTCAAAATCCGAAATCGAAACCAAAATAGGAGCAGAGTCAA
GTGTAGATTTGGTAACAATTGCTCAAGCAATGCATTGGTTTGATCTTCCAACTTTTTATG
AACATGTTAAATGGTTACTCAAGAAACCAAATGGAGTAATAGCAGCATGGTGTTACACTA
CACCTGAAATAAACAGCTCAGTAGATGCAATATTTGATAAATTTTACACTAGTGATACTG
GACCTTATTGGGAATCACCAAGAAAATTGGTTGATGAAAAGTATAAAACTATTGATTTTC
CATTTGAGGCTGTAGATGGTTGTGATCACAATGGACCATTTGAGTTCAAGATTGAGAAAG
TTATGGACTTGGATTCTTATTTTACATACTTGAAGTCATGGTCAGCTTATCAAACTGCAA
AAGAAAAGGGTGTTGAGTTGTTAAGTGAAGATGTTATTGAAAAGTTCACAAGTGCTTGGA
ATGAAGATGGAAAGAGTGAGAAAAAAGTGACTCATCCAATTTACTTGAGGATTGGAAAAG
TTGGAAATTTGGATTGAAAGTGTAATCAATACAATTAGTTATGTGCACTTGATCATCCAT
TTATTTTGTATTTTCTCTTGGTTGTTATGTATCTTTTAATAATAAAAGCATCTTAGTATA
AATTAATACATCTACTTGCACAATGCATTTGCAAA
