Microarray Probes on PGSC0003DMT400027239
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47563_PI426222305 |
JHI_St_60k_v1 |
CACCAACGTCTGCTCCATTTCGACATTAGAATGATTTCTAGTAATAAATTTGAAAGACGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027239
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027239 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G66980.1 |
+3 |
3e-73 |
162 |
78/181 (43%) |
suppressor of npr1-1 constitutive 4 | chr1:24997491-25001961 REVERSE LENGTH=1118 |
Transcript Sequence (1920 bp)
>PGSC0003DMT400027239 1920 pgsc_dm_v3.4
TTCTTTTGGGAATTATTATGATGGCATTCTATGAGTGTTATAGCTCAAGCAAAATTGAAA
GAGAGAATCAAGCCAGAGTTGAAAAGTTTTTGGAAGACTATAGAGATCGCAGACCGACTA
GATATACTTATGCAGATATTAAAAAGATAACAAATCAGTTTCAGGAAATATTGGGAGAGG
GAGCTTACGGGATCGTTTATAAAGGAACACTTTCGAATGAAATTCACGTTGCTGTAAAAA
TTCTCAATGATTCTGAAGGAAATGGGGAAGAATTTATTAATGAAGTTGCAGCAATGGGGA
AAATCCATCATGTCAACGTGGTTCGCCTAGTTGGCTTCTGTGCTGATGGAGTTAGAAGAG
CTCTAGTGTTTGAATACTTGCCAAATCAGTCACTTGACAAGCTCATTTTTCCGACAAGTT
TCAAAGATAATATCACCCTTACTTGGAAGAAGCTTCATGATATTGCTATGGGAATAGCAA
AAGGGCTAGAGTATCTTCATCAAGGATGTGACCAACAAATCCTTCATTTCGATATCAAGC
CTCAAAAATATTCTGTTAGACCATAACTTGAACCCAAAGATCTCTGATTTTGGTCTTGCC
AAGTTATGCTCTAAAGAGAAAAGTGTTATCTCTATGACTGAAGCTAGAGGAACCATGGGT
TATATTGCACCAGAAGTGTTGTCAAGCAATTTCGGAACAGCGTCTCATAAATCTGATGTT
TAAAGCTTTGGAATGCTGCTTCTTGAAATGGTTGGAGGGAGGAAGAATTTTGATGCAAAG
GCGGATACTAGCCAAATGAACTTTCCCGAGTGGATTCATGAGCGGCTGAATCAAGGAGAA
GAGTTGAAAATCAGGATTGAGGAAGATGATGATGTTATAATTGTAAGGAAATTGGCTGTT
ATAGGAGTTTGGTGCATCCAATGGAATGCGATAGATCGGCCATCCATCAAAGTTGTAACT
CAAATGCTAGAAGGAGATGAAAGGTCAAATCCATATGCCAAAGAGTTATGCAAACTCAAA
ATAGAAATATTAGCATTTGCATCCTGAATATGCCATGAAGTCATTGACATGAGGTCTACA
CTACACCCGACTTTCAAATCGGATGGTGATAATTCAGTCATGGTTGCATATGTGTGTCCC
TTAAATGAATCAGAAGAAACATTGGAAGCATAACTCCTGTTGAGACAATTAGTGATTTCC
ACAAAGACTGGAGAATTTAAGGCAAATGGACAGCTGAAGAGAGTGATTGGTACTGTTAAC
TTAACAAAACCAGGCATTGATTTTATAGAAGAATCAAAACCAGAAAGGGAAGTGTAAACC
GAAATCGAATTCTGAGGAAGAGAGCAAATAACTTGTTCTCTTATACCAGGATCTACAAGG
CGGATAGTGGAGTTATCGTAATTGATGGCTTGAACATAGTAGTTCAGTGATTCATTCCAA
TCACGTGGCAGTATTGTGATTATGGCGCGATCTCCTTCACAGCTCAATTCATAATTTTTA
AGGCCACAGTGCTTTGGATCACTTTTCAATCGAAAGGGAAAATTGATGTTATGAATATCC
CCACAACTAAAAGGGACACACTGATTTCTTTGTTCTGCTAATGGGGTTTCTCTTTAAAGT
TCCTAGTCATCTTTCTTATGTTGGAGTTGGAATATCTAATGGGCGCGAAATTGTTCTCAC
CGTGCAGGAAACTTTCAATTGCATCATAAATCGACAAATGCCTTCTTCGTAACTTAATCA
TTAGAAATACAACTATGCATGGAAATAGAACGATTCTTGGCACAATGCTAAGCCCTGTGT
ACAACCATCACAAATAAGCAAGAAAAGTTTGTGAATGGTTAAATTAAAAAATTCAACCAC
CAACGTCTGCTCCATTTCGACATTAGAATGATTTCTAGTAATAAATTTGAAAGACGAAAG
