Microarray Probes on PGSC0003DMT400027065
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46600_PI426222305 |
JHI_St_60k_v1 |
GTGTCAGCCATGACAAGTATCACTTCTTTTGTGGTTTCATAGAATGCTTCATTTGTTTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027065
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027065 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G44380.1 |
+2 |
6e-26 |
107 |
57/168 (34%) |
Cysteine/Histidine-rich C1 domain family protein | chr2:18323590-18324333 REVERSE LENGTH=247 |
Transcript Sequence (1653 bp)
>PGSC0003DMT400027065 1653 pgsc_dm_v3.4
ATTAAATCTCCAAATTACACACACAAAAAAAAAAAACTCTTATTCTTCTCAAACACAAAT
GGACTCCCATATGAAAATCAAAAACTTAGAAAAAAACGAATTCATCTCTCTCCGAGATCA
TCCATTCCCTTGTCGATTCCGTTACGTATCTGAAGTAAGCATTCAACAATCATCGATCAA
AAATCATCAATCGAACTATAGTAGTAATAATAGTACGATTGATGAGATTCAACAAGTTGG
AAACAATGAACGTAAACACTTCAGTCATCGACATAATTTGTTAACGTACTCGTTGCGTGC
CTCGGATTCTGTGCACTGCAATTTCTGTGAAACCACAATTTCAGGCATGTCGTACGGGTG
CAAACGTTGTAGGTATTTTCTACATGAGTCATGTTTCGAATTTCCACAAGTTATCGAACA
TTTGGCTCATCCTGGACATCAATTAATTCTCAAGTATAGTAGTAACGATCAATTTAATTG
CAAAGCATGTCACGTTGGTGATAATCCTGCTTTATTATTCAACTTTCATTATTCATGCGA
TCACTGTGATTTTTCTCTTCATATGGGGTGTGCGTCTATGTCTTATAAAGTTCTTCATAA
GGAAATGACATTGTCTGTATTTTACTCGAATCCTTTGAGGAATGAAGCCGGACCACTCCT
TTGTGATATTTGCAATCACTCGATAGAAAAATCGAGTGGTTGGGTATATTATGATTATGG
TCATAATTTTGTTACACATTTTGGGTGTGTTGCTGATTGTGTATACGGAAAAGGAGGAAA
TGATAAAGATTATATTATTGGTGTGAAAAATGGATTGATTAATCTTGATGGGGACGATAC
TTCTATAGTAAACTATCAAAAGAATGATGATGAAGGAATGAAATATAAGAGATTTTTTCA
TCGACATGTTTTGCAACAATTGGATAGGTCGATGGACAATAGTGTGAAGAATCGAAAATG
TGGAATTTGTGGTATGGATGTGAGTTCAGACAAGAAAAAAGGATGTTCAAGTTGTGATTT
CATTATTCATGAGAGGTGTTCTTTTTTGCCTGAGAAAATTCAACATCCGTTTCATCCACA
TCCACTAACACTTGTTCCTAAAAAAGACGGAGTTGAAGTTCAATGTGTTGGATGTCGTCA
ATCAAGTGGTTGTCACACAAATTACACAGTTTTGTACCAATGCAAGATTTGTGAATATCA
ACTTCATCCATCATGTGCTGCTTGTCCAAGGAGATTAAAAAAGCTTGATTTAACTTTGTG
TTACTCATTTCCTTATAAGAATGAGGTATCAAAGCTATATTGCAATTATTGTTCAAAAGT
TATCAACAAGGATGAATGGCTTTACTATGGAAGAAGTAATGATGAGAAGAGGCACATTAC
TTGTCAATTGGCTGTTGGGATTTCGAATTGTTATGTCACGTTACGCGATTTAGAGGTTGA
GTAATTAATAAACTAGGGTCGTTTCTCCTGTATTGGCCCAGAAATCGAGTGAATATTGTG
TCAGCCATGACAAGTATCACTTCTTTTGTGGTTTCATAGAATGCTTCATTTGTTTTATTT
TTATGAATAAATTTTGATGAATAGATATGTATGTACTTTGAAAAAAAATAATTTTGTGCC
ATGTAAGATTATTCTATAATTGGTTTTTCCGAT
