Microarray Probes on PGSC0003DMT400027035
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46627_PI426222305 |
JHI_St_60k_v1 |
TTAAGATCGGGAAAGCTCAAAAGACAGAACCACCTTCATAATTATAATGTTTGTGCATGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400027035
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400027035 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G54070.1 |
+1 |
1e-78 |
263 |
195/616 (32%) |
Ankyrin repeat family protein | chr3:20021330-20023603 REVERSE LENGTH=574 |
Transcript Sequence (1869 bp)
>PGSC0003DMT400027035 1869 pgsc_dm_v3.4
ATGGAGAGCGAGTTTTCCCATGAAATTGAACCAGTTTTTCAGGATTTTGAAGATGATGAA
CAATTTGGGTCTGGAGACGGAAGTGATGTTGAAAATCAACCTGTCAACACTGTAATATTT
GTTAATGACAGGAAACTGGATGGTAAAACTGCATTGCGAATTCTTCAACGTGCTGCTTTA
TATGATAACTGGAAGATTGCAGAACCAATTCTAAATAAGGAACCAAGATTTATTAATTTT
GAATTTGGAGAAACCTCTGAAACATTACTTCACGCTGCAGCATTAGCAAAAAGTAGCGGA
TTTGTGCGAGAGCTAATTAAACTAATGAAAGTAGGTGACTTGGAGAAAGGTGTGAATACG
GCATTTATGTTGGCAGCATTGGCAGGGCACATTGAAATTGCTAAAGCAATGAGAAAAAAG
AATAAGAATCTACCAAACATCTGTGGTAAGGAGGGAGATTTACCAATCTCTGTGGCAGCT
CAAGTTGGGCATAAAGCTATGGTATCATACCTTTATGAGGTCACAGATTTTGATGTGATA
CAGCAACAAGAACTCTTATACCTTCTTGAGATCACTATCCAGAATGAAATGTACGTGCTA
AAATTGCTTCCGGAAAGATATGTAGTTGAGAAACAAGCTGAGACACTACTTGAGGAGCTA
TGGGCAGAGTGTCTAAGAAGAGGAAGGGATAAGCTGTTAGACTTAGTGCTAAAAGAAAAC
TGGGTCCATTCTGCTGCAAAAGCAGGAAATCTAGGGTTTTTACTTGTGGTTACTCGTGAT
TTTCCTGTGCTCATGTGGACGAACGACGATAAAAGGCATACCATTCTTCACGTTGCAGTT
TTATATCGAGAGGAAAAAGTCTTCAGTCTTATACACCAAATAGGAGGAATGAAAAACATA
TTTCTTGTAGATTTTGACAATGATGGCAATAACATTCTACATTTGGCTGGGAAGTTAGGG
GAGCCAATATTCAGTAAACAGAAAAGTAGTGGACAGATGGAAGCCCTGAAAAACAAACTT
GTTCAGTCTGTGCCTCCTAATGCTGATAATAATAATAATGCTGTATTCGTTGAATCACTA
CAACAGCTGTTTCAAGAGATAGAAATCATTAGACACATAACAGAGACACAGTCTGTTAAG
GCGGAAGAGAAGATTATGCCGCCATCATTTCTTAGGGTTTCTGGAGCAGCACTTCAGATG
CAAAGAGAGATATTGTGGTTCAAGGAAGTGGAGAAACTTATACCACCTTCAGGCCGCAAG
AGGAGAAACAAGGATGGGAAAACCCCTAGAGAATTATTCACGGAAGAACACAAGATATTA
CTAAAAGATGGGGAAAAGTGGATGAAAGACACCGCAAATTCTTGTATGATTGCGGCAACT
TTGATTGCCACGATGGTGTTTGCTGCTGGATTCACTGTGCCAGGTGGTAATATGGATGAT
AATGGTTTTCCAATATGGCTAGAATTGAATGGATTTAGGATCTTTGTTATATCAGATGCA
GTGGCACTATTCAGCTCAATCGTTTCTATCATTATGTTCTTGTCCATTCTGACATCTCGC
TATGCTGAAGATGACTTTCTTGTGTCATTGCCTGCTAAGTTATTCTTCGGACTTACAGCG
TTGTTTGTTTCGATTGTTAGCATGCTTGTGGCGTTTACAGCAACCTTCGTTTTGATCTAT
AGAAAACATACGGGTTGGGAGCCAAAGCTCATTGTTGCTTGTGCTGGTGTTCCTGTGGCT
TTATTTGGGTGTTTACAGTACAAACTATGGTTCGATGTGGCAAAATCAACATATTGGTCC
AAGTTTCTTTTAAGATCGGGAAAGCTCAAAAGACAGAACCACCTTCATAATTATAATGTT
TGTGCATGA
