Microarray Probes on PGSC0003DMT400026968
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16204_PI426222305 |
JHI_St_60k_v1 |
AGCACTCTTAATCCTAAGCAAAAACAGCACTTAGCAAGGAAGCTTAACGTAAGGCCTCGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026968
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400026968 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G37790.1 |
+3 |
2e-77 |
243 |
154/288 (53%) |
Homeobox-leucine zipper protein family | chr4:17768241-17769272 FORWARD LENGTH=278 |
Transcript Sequence (1154 bp)
>PGSC0003DMT400026968 1154 pgsc_dm_v3.4
AAAATTTCATATGGGGTCAGAAGAAATCAATAGTACTAGTACTATATAGTATAAACTGTA
GTGCTCCATTTTAACCCACCGAGCAAGAAAAACGTCTTTCTTCAATTTCATTTTCCTTAT
TCCCCTGTTTCCCTAATTTAACCAGAATATCAACCTTCCAAGGCTCTCTTTATAGATTTC
AACAAAACTCAGAATTGCTACTAAATATATACGATTTCTCACTGATCATGGATAGTACTT
GTGATAATATATATAGCAGTGCTGGTCTTGATTTAGGATTAGGCTTTTCATCAATGGGGA
ATCAAACATCAAAAAAACACGGACAAGTAGCTGCAGTTAAATTCGATCTCGGTTTTGAGC
CCTCTCTGAATTTAAGCCTTTCTTCCGGTGATCATCAGATGGTAGATCTGAAGACGGAAA
ATAAGGATCAATTATCTGTTGCTTCGTCGTATTCAAATGGCAGTGTGAAAAGGGAAAGAG
ATATTGGTAGTGAGGTGACAGAAGTAGAAAGAGTGATTTCTTGTAGAGTAAATCATGATG
AAGATTATTATGAAGATGATGATGCTTCAAATGGAAAGAAGAAACTTAGGCTCACCAAAG
TACAATCTGCTCTGTTAGAGGAAAGCTTCAAGAAACAGAGCACTCTTAATCCTAAGCAAA
AACAGCACTTAGCAAGGAAGCTTAACGTAAGGCCTCGTCAAGTTGAAGTTTGGTTCCAGA
ATAGAAGAGCAAGAACGAAGTTGAAGCAAACAGAGGTGGATTGCGAGTTTTTAAAGAAAT
GTTGTGAGACACTAACAGATGAAAACAGGAAGCTTTACAAAGAATTGCAAGAACTGAAAG
CTTTAAAAGTTGGGCAGCCGTTGTACATGAAGCTGCCGGCTGCAGCCACCCTCACTGTGT
GTCCTTCCTGCGAAAGAGCCGGCGCCGCCCAAAACTCAACCAAGCCTCATCACCGCTACG
GCTCCTTTACCAATCCCTCCGCAGCTTGTTAATTAATTAGTATTCAAATTGTCTTGTTGA
TTAATTAAATTCTCAGGAAATCTCCCAAAACTTATTAAGATTTTTTTTTTTTGGTTAAGG
GTTTAATTTGTACTATAATGAAATGACTTGTATAGTTCATTTGTTAATTAGAGGTTTGCT
AATTAATCATTAAT
