Microarray Probes on PGSC0003DMT400026783
Probe ID | Chip | Probe Sequence |
---|
CUST_42560_PI426222305 |
JHI_St_60k_v1 |
GTGTGATATCGATCGGATTATTTCGCTTCATACTAAGAAAGTAAGGATGGAATTGGAAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026783
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400026783 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G12920.1 |
+1 |
2e-72 |
234 |
151/352 (43%) |
SBP (S-ribonuclease binding protein) family protein | chr3:4122127-4123323 REVERSE LENGTH=335 |
Transcript Sequence (1271 bp)
>PGSC0003DMT400026783 1271 pgsc_dm_v3.4
ACCTCTAAATCTCTCTCTCTCCATTTTCTCTCAACAACAAAAAAATCCATTAGCAGAGTT
ATTTCAATGGCAGTTGAAGCAAGACATCTCAATCTTTTCACTCAACAACAACAGCAAATG
GTTTCGAATCAAGGTAATGGGTTTTCCTACAATACCCAGATGGGTGGTTCTTCTCTTTTG
CCGTTATCGACGCCGGAGAATAGTTTTTTGCCGTTTCATCAGAGTTTGATGTGTGATTCC
GTTCAGCCAAAAACGTCGGTGAATACTGATAGTGGTCTCACTTTCAATCTTCCCACTACT
GTTAACGCTACCAATGCTGCCGCTGTAGCGGCGACGAGGAAGCGGTCGAGGGATTCGTTT
AATCAGTTTAATACTTGTAATACTACGTCGTTTGTTGGAGATGACGTTTTGCCACTTCTA
CAACAATATCAGTGTGATATCGATCGGATTATTTCGCTTCATACTAAGAAAGTAAGGATG
GAATTGGAAGAAAGGCAGAAACATCAAGCGAGAGTGTTGGTTGCAGCAATCGGAGAAGGT
GTATCAAAAAAACTGAAAGAAAAAGATGAACAGATTCAAAGAATGGGGAAAATCAATATG
GTTCTTCAAGAAAAAGTGAAAAGTCTGTTCGTTGAAAATCAGTTATGGAGGGATTTGGCA
CAAACAAACGAAGCAACAGCAAATTCCCTTCGCAACAACTTAGAACAAGTATTGGCCCAC
GTCGGCGATGAACGAATCTCCGCCGGCGGTAACCTCGCCGGAGCAGCAGTAGAGGAAGAC
GCCGAATCCTGCTGCGGCAGCAGCGACCACGGGGCTGCAGCGGAAGAAGAGGACGAAATT
GAAGGCCGGCGCACTGTAGTCGGTGAAGCGCAGGATAACAGGATGTGCAAAAGGTGTGGT
GAGAGGGAATCATGTGTTCTGCTATTGCCATGCAGGCACCTTTGCCTGTGTGCTGTTTGT
GGATCAAGTTTAGTCCATACATGCCCTGTATGCAACTCTAACATGAATGCCACTGTGCAT
GTTAACATGTCTTCTTGATTGATCAATCAATCAAAATCCAAAAAAAAAAGAGATGAAACA
ATTTCTAGGAAAGAGGAAAAGAAACCATAGAATTTTGTTCATGTAGAGATAAATGCTAGA
ATTTTTAGTTTGTAAATTTCTTTAGTAATTGTGACATGCAAATTGTTCATTCTTTTTATC
TCCATATATGTTCTTAATTCACCATTGTCATATTGATGGTATTGGAATTTCATAGTTCAA
TTGTGTACAAA