Microarray Probes on PGSC0003DMT400026501
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41883_PI426222305 |
JHI_St_60k_v1 |
GGGCCAAGCGATATTCAACACTCAGATACGGTTATTTGGTTCAATATATATACATAATAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026501
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400026501 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G18550.1 |
+3 |
6e-162 |
471 |
233/391 (60%) |
alpha/beta-Hydrolases superfamily protein | chr4:10225006-10226862 REVERSE LENGTH=419 |
Transcript Sequence (1650 bp)
>PGSC0003DMT400026501 1650 pgsc_dm_v3.4
AATAACTAACAAATACCCTGACAGCAAAGATGTTCAAAGCAACAAAAAAGGAAACCATAG
AAAAGATGTTCATGCCCAAATTGTTATTAGCACTTTGCATCTTTTCTATGGTTTCTCCGA
CCGTAGAAATGATGCAACAAAATGTAGACAAAAATATGGGCAATATAACAGCAGAAAGAT
GGAGGCTTCTTAGCGGAAATAACAATTGGGAAGGCTTATTAGATCCACTCGACAATGATC
TTCGTCGGTACCTCATTCGCTATGGCGAAATGGCACAAGCAGCTCGAGACGCCTTCAACA
CCAATAAAATGTCGAAGTATGCTGGAAGTTGCCGATATTCTAAGAAGAATTTATTTTCTC
GAACGGGGATTGAGATATCGAATCCATTCAAGTATGAGGTAACTAAATATATATACGCAA
CATCATCTGTACAAGTTCCGGACGCATTATTCATAAAATCATTGTCAAGGGAAGCTTGGA
GTAAAGAGTCAAATTGGGTTGGTTTTGTTGCTGTGGCTACAGATAAGGGGAAAATTGCAT
TAGGAAGAAGGGATATAGTGATTGTGTGGAGAGGAAGTGTTCAGACTATGGAATGGTTTA
ATGATTTCGATTTCATTCAAGTTTCATCCCCTAAAATCTTTGGTGAAAAATCTGATCCTA
AAGTGCATCACGGTTGGTATTCCATTTATACTTCAGATGATTCGCGATCACCATTTAATA
AGGGAAGTGCTAGAGACCAGGTACTTGGTGAAGTTCAAAGATTGTTGGAACAATATAAGA
AGGACGAAGTTACCATAACAGTAACAGGGCATAGCATGGGGGCAGCCATGGCAACATTAA
ATGCAGGGGATATAGTTTTCAATGGAATTAACAAAGGATTTCCAGTCACCGCATTTCTAT
TTGCAAGTCCTAGAGTGGGAGATGAAAATTTCAAAAAGACTTTCTCAAAACTCGAAAACC
TTCGAGCTTTGAGAATTCGAAATGACCCGGATATAGTTCCAAATTACCCATTGTTCGGCT
ACTCAGATGTTGGTGTCGAATTGGTCATTGACACTAGGAAATCGGGATATCTAAAAAGTC
CGGGAGATCAGAGCAGTTTTCATAATACAGATTGTTACTTGCACGGAATTGCTGGAACAC
AAGGATCAAAAGGAGGATTCAAACTAGAAGTGGAACGCGATATTTCACTCATTAATAAGT
ATTTGGATGCGTTAAAAGATGAATACGGTGTACCAACTTCATGGTGGGTTGAGAAGAATA
AAGGAATGGTTCAACAACAAAATGGATCCTGGATTCTCGTGGATCATGAAGATGATGATT
TTTAGTTCTTTTAGATGTTAGATTTATGATCAGGAAGAAATAATATAGTATCCGATTTTG
ATTCCATGATTGATTGGTCCATCATGTAGACACGTATGAGAGGATAAATTTTTTTTCTTT
TGGGTTATTTGGAAGTAGGGCCAAGCGATATTCAACACTCAGATACGGTTATTTGGTTCA
ATATATATACATAATACACTGCAACAAAAAATAAATAAATTGCAGTAGTTATTTAGCTGC
AATAGTATTTTATATAAATGTCATTACGAATGTAATAATATTAACAATTGACGTTAAATG
TTTTTACAAGTAATAAATATCGTCGTTAAA
