Microarray Probes on PGSC0003DMT400026491
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41884_PI426222305 |
JHI_St_60k_v1 |
GAGTGTCTTCACCTTCCTTAAGGTGCGTGAGAAGAAAAAATTATATGTTAAAATGACGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026491
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400026491 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G27420.1 |
+2 |
3e-111 |
335 |
168/324 (52%) |
Cysteine proteinases superfamily protein | chr2:11726311-11727519 REVERSE LENGTH=348 |
Transcript Sequence (1303 bp)
>PGSC0003DMT400026491 1303 pgsc_dm_v3.4
ATTTTATTACCATTTACTATCAATGGCTTTCAATTTTTGCCTCAAGAATATTATTATTCT
TGTTCTTTTTTTCATTCTTAGCCTATCTCCCTTTATAGTAACTTCCCGCGACTTAAAAGA
ATTATCCAAATTATCCATGCTTGAAAGACATGAAAAATGGATGGCTCGTCATGAACGTGC
ATACAAAGATGAGATAGAAAAGGAACATCGCTTCAAAACATTTAAGAAAAACGTTAAGTT
CATCGAATCGTTCAACAAGAACGGAACTCAACGTTATAAGTTAGCCGTCAACAAATATGC
TGATCTGACCACTGAGGAATTTACAGCATCATATATGGGACTCGACACTTCATTATTATC
CCAGCAAGAATCAACAGATACAACAACGTCCTTTAAATATGGTAGTGTGACTGAAGTTCC
ATATAGCATGGACTGGAGAAATTCGGGCAGTGTCACAGAAATCAAAGATCAAGGTGTATG
TAGCTGTTGTTGGGCATTTTCAGCGGTGGCAGCTATAGAAGGAGCATATCAAATTGCAAA
CAACGAACAAATTTCACTTTCAGAACAACAGCTGATAGATTGCTCTACACAAAACAATGG
TTGCAAGGGTGGACTAATGACTAACGCCTACAACTTCTTACTTCAAAATAATGTGGAGGG
CATTACCACGGAGAGTAACTATCCTTATGAAGAAACTCAAAGCATTTGCAGCACGGAATT
ACAATCAGCAGCAGTGACAATCAGTGGGTACGAAGTTGTACCAGCCAGTGAATCTGCCTT
ACTACAAGCCGTAGCGAATCAACCGATATCTGTTGGTGTTGCTGCTAACGAGGAGTTTCA
TTTTTACAATGGTGGGATATATGAAGGAAGTTGTAGCCCTAAGCTGAATCATGCAGTGAC
AGTGATAGGTTATGGGACAAGTGAAGAAGATGGTACAAAATATTGGATAGTGAAGAACTC
ATGGGGGAGGGGTTGGGGTGAGGAAGGATATATGAGAATTGCTAGAGATGTTGGGGTTGA
TGGTGGCCATTGTGGCATTGCTAAAATTGCTTCTTTTCCAACTGTTTGAATTGTTATGCT
AAAAGGCATAAATTTTCTCCTAAACTTGTGTCGAAAAGTCAGTTACACGCTCAAACTATT
ATGACGACGTATTACACACCTAATTTTGTTCAAAGTGATATTAATACCCCCTTAGAACGT
GACATGACAAAGAGAGTGTCTTCACCTTCCTTAAGGTGCGTGAGAAGAAAAAATTATATG
TTAAAATGACGAATTTCAACACATGACACTATTTTATTGGTCA
