Microarray Probes on PGSC0003DMT400026276
Probe ID | Chip | Probe Sequence |
---|
CUST_27109_PI426222305 |
JHI_St_60k_v1 |
ATATCCTCGTCTGGCGACTGTCGATGACGATAAGGACTTTATTCCATTTGTGTTCATCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026276
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400026276 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G73325.1 |
+1 |
5e-06 |
46 |
49/181 (27%) |
Kunitz family trypsin and protease inhibitor protein | chr1:27567518-27568186 REVERSE LENGTH=222 |
Transcript Sequence (669 bp)
>PGSC0003DMT400026276 669 pgsc_dm_v3.4
ATGAAGTCGATTAATATTTTGAGTTTCCTCTTGCTTTCAAGTACCCTCTCTTTGGTTGCC
TTTGCTCGATCTTTCACTTCTGAGAATCCAATTGTCCTCCCCACAACTAGTCATGATGAT
GATAATCTTGTACTCCCTGAAGTTTATGACCAAGACGGCGATCCGCTGAGGATTGGCGAG
AGGTACATTATTAACAATCCTCTCATCGGGGCCGGAGCCGTATACTTGTACAATATTGGA
AACCTTCAATGCCCAAACGCCGTGTTGCAGCACATGTCAATTCCCCAATTTTTGGGAAAA
GGCACGCCCGTCGTATTCGTTCGTAAGTCGGAGTCGGATTATGGTGATGTGGTGCGTCAA
ATGACTGCTGTTTATATCAAGTTCTTTGTTAAAACAACAAAGTTGTGTGTTGACCAAACT
GTTTGGAAAGTTGATGATGAACAGTTGGTGGTAACTGGTGGTAAGGTAGGAAATGAAAAC
GACATCTTCAAGATTAGGAAAATTGACTTGGTGACACCAGGAAGTTCCAAAAATGTATAC
AAGTTACTGCATTGTCCCTCTCATCTTCAGTGCAAAAATATCGGCGGCAACTTTAAAAAT
GGATATCCTCGTCTGGCGACTGTCGATGACGATAAGGACTTTATTCCATTTGTGTTCATC
AAGGCGTAG