Microarray Probes on PGSC0003DMT400026240
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27064_PI426222305 |
JHI_St_60k_v1 |
GTTGAAATTTCTTGGGTCCACCAATTAGATTATTTTCTAGGTACATATGGTTGGTCGTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400026240
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400026240 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G52510.1 |
+1 |
4e-151 |
461 |
318/694 (46%) |
SCARECROW-like 8 | chr5:21307196-21309118 FORWARD LENGTH=640 |
Transcript Sequence (2499 bp)
>PGSC0003DMT400026240 2499 pgsc_dm_v3.4
ATCATGACAAGAATCAATCAAATTGCTTAACAACAAGCTATTTTTCTCTCTCTTTCTCTC
TATAAGGAAATTACCTTTTCCCTGTAATGCAGAATTTTGATAAAGATCCAAACTTTTGAG
GTTTTTTTGAAGATCATAAAGCCATTTTGGCCGGAATTTTGTTTAAATATGTCGTCAGGT
TTCTCCGGCGAGTTTTACGGTGCCGGTGGGAGCAACAATGGAAGATCTACCATAAATAAC
AACTCACAAAGGCCTTATTCTTCACCGCTATCGGGTATTTTGCCTGACCCGGTTACACAG
ATCGTTCATCAAGGGAGACCTAATTTGATGGGGAAGCGATCTCTTGCGGAGTTTCAACAA
CAACAACAATTGCAGTTTCTACAACTTCAACAGCAGCAGCAACAGCAGAAACAACAGCAG
CAGCAGATGATGCTACTTCAACAGCAGCAGCAGCAAGGACTTGGGTTTTATCTCCGTAAC
GTAAAACCCAGAAGTTATCAGCAGTCTTCTCCAATGTCTCCTCTTTCCCCTGTAGATTTT
TCTGTTGCCGCTGCTGCTGCTTCTTCAATTTCATCTGAATTTTCTTCGAATTCAAATGTC
TCTACGATGATGAACACGCGCCACGCTCTACCTGTTCACCAGCAATTCCGGTCACAGCCT
GCTAATATTGGTGGGTTTTTATCTCCAGGTATTCAGAATTATTCTACAGGGGTTTCGTCT
CTAAATCCGGTTCAAAACAGAGCAACCATCGGAGTACAGGAACTGTTGTCACAAGAATCG
GATAAAAAGATGATGAATTGTCTTCAAGAGATTGAGAAACAGCTCTTAGACGACAACGAT
GAAGAAGAAGGCGACACAGTTTCAGTCGTCACCAACAACGAGTGGTCGGAGACAATACAG
AATCTGATTAGCCCCTGTCATAATCAGAACCAAAACCAAATTCAGAAACTGGCATCACTA
TCTCCATCCTCTTCAACTTCTTCGTGTGCTTCTTCAACAGAGTCTCCGTCAATATCTTGT
CCCAAACAGTCTATAATAGAAGCAGCTACAGCAATATCCGATGAGAAAAACGACGTCGCA
GTGGAGATCCTCACGCGCCTATCACAAGTTGCCAATATCAGAGGTTCCTCTGACCAGCGG
CTAACGGCGTACATGGTTGCCGCTTTACGGTCGCGCGTGAACCCCATCGATTACCCACCG
CCGGTGCTGGAGCTGCGAAGCAGAGAGCATACAGATACTACTCATAATCTATACGAGGTA
TCTCCCTGTTTCAAGCTCGGTTTCATGGCTGCCAATCTAGCTATCCTTGAAGCTGTAGCT
GACCACCCTTTCAACAAGCTTCACGTCATTGATTTCGACATCGGCCAAGGCGGACAGTAC
TTGCATTTACTGCATGCACTGGCTGCCAAGAAATCAAACAGCCCAGCCGTTTTAAAAATC
ACGGCTTTCACAGAACAAGCAGGCGGAGTTGACGAGAGATTCAATTCTATCAACGTGGAG
CTTAACTCCGTCGCTAATCGGCTTGGGGTCTGCTTATATTTCAACGTAATGTCTTGTAAG
GTAACCGATTTGAGCCGGGAAAACTTAGGGCTTGAACCTGATGATGCATTAGCAGTGAAT
TTCGCATTCAAATTATACAGATTACCCGACGAAAGCGTAACAACGGAGAATCTCCGTGAC
GAGCTTCTCCGTCGGGTAAAAGCGTTATCACCGAAGGTGGTAACGGTGGTGGAGCAAGAA
ATGAACGGCAACACCGCTCCTTTTCTAGCGCGTGTGAATGAAGCGTGTGGTCATTACGGT
GCAATATTCGACTCGCTGGATGCTACAGTGTCAAGAGACAACATGGACCGAGTTAGGATC
GAAGAGGGACTGAGTCGGAAAATGTCTAATTCGGTAGCGTGCGAAGGGAGGGACCGCGTT
GAAAGATGCGAGGTATTTGGGAAGTGGAGGGCCCGTATGAGCATGGCTGGGTTCGGGCCG
AGGCCCGTTAGTCAAATCGTGGCGGATTCTTTGCGTTCAAAGCTTAATTCGGGTACACGT
GGCAACCCGGGCTTTACCGTGAATGAACAAAGTGGAGGTATTTGCTTTGGTTGGATGGGA
CGAACTCTCACCGTCGCATCAGCTTGGCGTTAACTTTAGCATTATTTTCTAATCAAGAGA
AAAATATTCTGATTATTATCTTATTAATATTAATCTTCAATGTGATTTGCTGTATTAAGG
GGCTTTCTTTAATTTTGGTTATTATTATTATTGTTAATGAAAATTCAGATGATGTCCCTC
ATTCGAAAAAAAAAAAGGCATGAATATTAATATTTAGATTCTCTTTTTGTAAATATATTT
GTGTTAGTGCATGTATCGCTGTTGGATACATTTTATTTTTAGGCTATGGTGTTTGGCAGA
ATGCGGACTTGTGTTTGTATTAAACGAATGGCTTTAGATGTTGAAATTTCTTGGGTCCAC
CAATTAGATTATTTTCTAGGTACATATGGTTGGTCGTGT
