Microarray Probes on PGSC0003DMT400025690
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_7381_PI426222305 |
JHI_St_60k_v1 |
CCCTTTAGCTATATGTAATTAATTCAGGTTGCTTTATTCTGAAACCTGCATGTTGCTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025690
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400025690 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G76420.1 |
+1 |
3e-95 |
293 |
159/269 (59%) |
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:28672029-28673835 REVERSE LENGTH=334 |
Transcript Sequence (1331 bp)
>PGSC0003DMT400025690 1331 pgsc_dm_v3.4
CCTATTTTGTTTTGTTTTGTACTATATAAATGCATGCTACCTCCACTTTAATTTGTTATT
ATTATAACCACATATCTTGAAAATCAATCACTTTTTAGAGTTAGAGAAGAGATGTTGGCA
ATGGAAGAAATATTGTGTGAACTGAATAGAGAGGAGATGATGAATGAACAAGGTCTTCCA
CCTGGTTTTAGGTTTCATCCTACTGATGAAGAGCTTATCACTTTTTACTTAGCCTCTAAG
GTCTTCAATGCTACTTTTTCTGCTGGTATTCAAATTCCTCAAGTTGATCTCAACAGATGT
GAACCCTGGGAGCTTCCAGAAGTGGCAAAGATGGGTGAAAGAGAGTGGTATTTTTTTAGC
TTGAGGGACCGGAAATACCCAACCGGGTTAAGGACGAACCGGGCAACCGGAGCGGGTTAT
TGGAAAGCAACCGGTAAAGACCGTGAAGTTTACAGTGCAACTAACGGAGCACTCCTTGGA
ATGAAGAAAACACTTGTTTTTTACAAAGGAAGAGCTCCAAGGGGTGAGAAAACTAAGTGG
GTTATGCATGAATACCGTCTTGACGGTGATTTCTCTTACCGTTACTCTTCTAAGGAGGAA
TGGGTGATATGCAGAATACTACACAAAGTAGGGGAGAAGAAAAATGCAATATATGAAGGG
GCAGGTGGTGGTGGTGGGTCTACATACCCTACTTTAAAAACATGGTCATCATCAGCAGCA
GTGAATTCACCTTTAACAACAAATCCAAAAACATTACAAATATCACACAATAACCATTAT
CTATTTCAGCACCATGAAAATGACCTATTGAAATCCCTCTTTAATGTTTCCCAAACAACA
AACCTATTACCAATGAATAATAATGTTGCCTTTTCCTCAACCAAAAGATACAAAGACAAC
AAACAAGAGGAGGAGGATATGACAAACAAAAACTCATCCAATAGCGTTGTGATCAATCAA
CAAATTTGCATGAAATCATCACAAGGCAACTACTTATCTTCTCCGTTATGTTACAACAAT
AATGATCAAAATGATGCTTTTGTGATGAATAATTCCGATTGGAGTAGTAGTTTAGCGGGA
ATGGAGGAGGGGATTATACCATGCAATTATTTCAATAATGTTGTGATGGATAATTGTCCC
ATCAAAATTGCTGCAGAATCTTGGCCTCTCCATCTCTAGTAGTATGTACCTAGGGAGTAA
TTAATTATGACTAGTGTTATGTCATCCCTATAATATAAAGAGCTACCCTTTAGCTATATG
TAATTAATTCAGGTTGCTTTATTCTGAAACCTGCATGTTGCTTGTTCCTTTAGTTTTTTT
ATATATGTAAG
