Microarray Probes on PGSC0003DMT400025631
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_7515_PI426222305 |
JHI_St_60k_v1 |
GTTTCATCTCGTGGGATTGTACTAGGTATGTTGTTGTTGTAGTCATAATTGTATTCTATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025631
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400025631 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G34930.1 |
+1 |
2e-114 |
377 |
306/889 (34%) |
disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905 |
Transcript Sequence (3037 bp)
>PGSC0003DMT400025631 3037 pgsc_dm_v3.4
ATTGTCTAATAAATTTCTCTTTGATTATTGAGCAAAATTTTGTCACCAATGGAAGGTGTA
AATTTACTACTAGTCCTTCTTCTTGTAGCTAGTAGTACTATATTAGATGGATTGTTATTA
TGCAGAGCTATGAATTCAGACATACTTTGTGATGAAAATGAAAAAAATGCTCTTATCAAG
TTCAGACAGGGTTTCAGGGATCCATCACAGTCAATGATCATGTCGTCTTGGATGGTCGAG
GAAAATTGCTGCAACTGGAAAGGTGTTGAATGTGACAACACAACCGGATACGTGATCACT
CTTGACCTGCACCAGCAATTCTTGCAAGGTGAGTTTGGGACTTACTTGCTTGGCTTGTCT
CATTTAAGACACTTAGACTTAAGCCAAAATGATTTCCTTGAGGCCTTGTTTCCTGATTTC
ATTTGCAAATTTAAGTACCTAGAGTATCTCAATTTGCACAAAACCAAGTTTAGGGGATCA
ATCCCTGAGTGTCTTGGAAATCTGTCGCGGTTGCAGTTACTTGATCTTGGTGATGGTTTA
TCACTCCGGGTTGATAGTCTTGAATGGATTCAGCATCTTTCCAATATGAGGATTCTTGAC
CTGAGTGGAGTTGACCTGAGCAATGCCAAAAACTGGCTACATGACATCAATTTCCTAAGG
TCTCTCGTGGAATTACGTTTGTCTTCTTGTCAGCTTCCTAAATTGCTTCCTGTTTTTGTA
AATTTCACATCCCTTCAGGTTCTTGACCTCTCGTTAAACTATCTGGATGTTCCATTTCCT
AGCTGGTTAGTCAATACAAGCTCTCAGAGTCTTGTTTATCTTAATCTCAAAAGAAGTCTG
CTGCATGGTTTACTTCCAAATACCGCCTTTGGAAACATGTACTCACTTAGAGTTCTTGAT
CTTTCTGACAACTCTATCCGAGGAAAGCTTCCGTCTTTTGAGAACATGACTTCAGTTACT
TCTCTTGATATCTCAAGGAATTCTCTTGTAGGCAAATAACCGCCAACCCTGCCTTCAAAG
TTGAAACATTTGGATCTTTCATCCAATAATCTGGAGGGTCCTTTAGCAAGAAGCATCGCA
CAACTTAGGCAATTAGTTGTCCTCAATGTTGCTTGGAACTCTTTCAATGACTCAATTACT
GAACATTTCTTGAATTTCAGTGATTTGAGAATGTTAGACTTGTCATCCAACTCAATTATC
CTCAATATAACTGCAACTTGGATGCCTCCTTTTCAACTTGACATTATTGGCCTGATGTCT
TGCCAACTTGGTACACAGTTTCCTCAGTGGCTTCATACACAAAAGGATTACTCATTTATC
GATATCTCTCATGGTAGCATCTCAAATGAAGTGCCTGATTGGTTCTGGAGTCTCTCTGCA
AAGGTACAGCACATGAACCTTTCTCTCAACTATTTCAGAGGGGAAGTACCTCAAGTTACA
TCAAGACTTGATAGTCTTGAAAAACTAGACCTGAGCCAAAACAACTTTTCTGGTCCTTTA
CCTCATTTTTCGTCCAAGATGAAGATGTTGATTTTGTCCCGGAATTCTTTTAATGGCGCC
ATTTCCCCTGTATGTGAATCACTTGTCATGAATAATTCTCTTATGTTTTTAGACCTATCG
TTCAATAATCTATCAGGAACACTTTCAGACTGTTGGAGATATGGGAACAATCTGGCAGTA
TTAAAGTTAGGCTATAATAATCTGTCTGGTGAAATACCTCATTCTTTTGGATATCTTGAA
ACTCTCAGGTATCTGCAACTGAAAAACAACAGGCTGTCCAAAAATCTGCCTTCATCACTG
AAGAACCTACAAGGACTAAAAATTCTTGATCTTTCCGGAAATTGTTTATCTGGAAAGATA
CCATCTTTCTTAGGGGAGACTTCACAAAATCTATTGGTTCTTTTGTTAAGAAAGAACAAG
TTCGATGGAAACATTCCCCTACAGATTTGCCAGCTCAAAAACTTGATTATTTTGGACCTT
AGTTCCAATTCTCTATCAGGCACCATTCCAAAGTGTGTTAAAAATTTCCTAATGATGGCT
GGGGTAGAGGAGCTCCCTTCCTTGGTTTATGGTCCCTATGAAGAATACAGGAAGGATGTG
GCGTTGATGCTAAAAGAGAGAGGCTATGATTATAGTTTTGCCTTTATGGCGGTGATTGAT
CTATCAGATAACCATTTATCAGGGGAAATTCCTGAGGAAATCACCACACTTGTTCAATTG
CAGGTATTGAATTTATCAAGGAATAATTTAACTGGAGCAATTCCTTGTAAGATTAGTAAA
ATGCAATCTTTGGAAGCTCTTGATGTTTCCTGGAATCGTCTGTCATCCTTCTTGCCTTCC
AGCATAGTGGAGCTTTCCAGGCTCGAGATCGCGAATTTTTCGTTCAATAGTTTGACAGGA
AAAATTCCAATAGGTGGTCAATTTTTAACCTTTGAAAATAGTTCTTATATTGGGAATCCA
GATTTGTGTGGCATGCCACTTTCCAAAAGCTGCTCGGGACATTTTCTTGAGGACATTACT
CACTGTAACTCTCCCAAGAAAAAAGACGTGCAGGCCATTCATCAGCATGAGGAAGACAAT
TGGCTTGATGAATCATCATTCTATATCAGCATGGTAATTGGTTTCATCACAAGTTTCTGG
TTATTTTGGGCTACTCTATTAGTGAAAACATCTTGGAGACATTCCTATATGAGGTATCTT
AATAAAATGGGCAACAATATTTATGTGTTTGTAGCCATAAGATTACCAAATAAGCATAAA
CCATCAAAGATGAAAGATTGAAGTTCTTTCAGGGATTGCTGAATAAGGTAATGAAGGTCT
TATTTCTGGTGCAACTTTCTTTTGTTGTTTTGTTTTCTAGGAGCTCTTCTGGTTTTGTTT
TTGTAAAATCTTCTAAGTACTATATTGTGTATGCCTAGTTGCATTGTTTCATCTCGTGGG
ATTGTACTAGGTATGTTGTTGTTGTAGTCATAATTGTATTCTATGATATGTTTTGTGGAT
ATCTAAGTAACTTGAGAATACTATTACTAATGTTTTT
