Microarray Probes on PGSC0003DMT400025578
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_7887_PI426222305 |
JHI_St_60k_v1 |
GTGCTATTATAATGAACATGTTATGAAGTATGAATCCCCATCCCCCACACCCTTACACCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025578
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400025578 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G60420.1 |
+3 |
5e-41 |
122 |
57/110 (52%) |
DC1 domain-containing protein | chr1:22261978-22264243 FORWARD LENGTH=578 |
Transcript Sequence (1024 bp)
>PGSC0003DMT400025578 1024 pgsc_dm_v3.4
GTTTTATTTTGTAGGTTTCTGTTGCTTCTTTAAAGGGGAAAACAGTTGGACTTTACTTCT
CAGCTCAATGGTGCATTCCTGCGAAAAAATTTACTCCGAGGTTAATTTCAGTCTACAAAA
AGATTAAGCAGCAGCTAGAGGGAAAGGAGGATGAGGATTTCGAGATAGTGTTCGTATCAA
GTGACCATAACCAAGTGGATTTCACAACGTATTTCGAGACCATGCCCTGGCTAGCAATTC
CATTTGATGATCCAACAATCAATGCTCTAGCTAAGTATTTTGATATCCGAGGGATTCCGA
GCCTAGTGATATTGGGTCCTGATGGTAAAACAGTGACCAAACAAGGTATATAGTATTATC
ACGTGTGACCATCTCATTTGAAAGCTTTCATTACTTAACTAATATTATGTCTCGACAGGT
AGGAGCCTCATCAACTTATATAAAGAGAATGCTTACCCATTCACAAAGACTAGAGTAGGC
ATATTAGAGAAGCAAATGAATGAAATAGCAAAAGGCCTTCCTAAGACTGAGAACCATTCG
GGCCATCGACACGAGCTCACTTTAGTACCAGAAGGCCATGGAGGTGGAGCTTTTATCTGT
TGTGATTGTGATGAACAGGGCTATGGATGGGCTTATCAATGCCTTGAGTGTGGCTATGAG
GTACACCCCAAGTGTGTGAATCCCGTGCGCCGCGACCCAGACAACTAATATATTGGGCTG
ATCATACGTTCTTACATGTTATATGTAGAGATAAATAGGTAAAAGGATACCATAATGTAT
AATTAGGTATAAAGCATGTCTTACTGACATGTTATTGTGAATTTTTAATGGGCCTTTGTT
TATGGAATTCACAACTTGTAGTTGTTGGTTTGAGAAGTCATCACATATGAGCCTTTGGAA
AAATCACAAATGTACATAAAAATGTGTTTATTATACTCCAGGATGAGTCATTATCATTCT
TTGTGCTATTATAATGAACATGTTATGAAGTATGAATCCCCATCCCCCACACCCTTACAC
CTCA
