Microarray Probes on PGSC0003DMT400025577
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_7483_PI426222305 |
JHI_St_60k_v1 |
GTGCTATTATAATGAACATGTTATGAAGTATGAATCCCCATCCCCCACACCCTTACACCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025577
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400025577 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G60420.1 |
+3 |
3e-64 |
200 |
122/280 (44%) |
DC1 domain-containing protein | chr1:22261978-22264243 FORWARD LENGTH=578 |
Transcript Sequence (1955 bp)
>PGSC0003DMT400025577 1955 pgsc_dm_v3.4
ATACAAATGTAAATCTTGAATTGCGATCTACATTTGTTTGACGAGCTAGTTTTGTTGAAG
GCAAAAGCAGATGATTTGAATTAGGACATGTTGGTGTCTCAAAGTAATAGTAGATGGACT
AATGTGATTTGAGATCTTTGGTATGACAATTATCTACTTGGAAAGTTACAACTTGAAACA
TTGTTAAGCTGCAATTGGTATGGTCGCTCAGCAATTTGTTAGTATCGTGAATTTTGCGTA
TGATAGCATCCCCTTTTATGTATTTGCCCGTTCTCTGTTGATGTAAAAGCCTCATTTCTC
TCCGGACATGTTAATCTGTGTGTGCGTGTGTGTGTAATCTTTAAACTCAGGGACATGATT
TTATTTTTTTGCTCCATTGGAATAATCTTTGCTTGTACTTCACATAATTTTATGATGTAG
CGGTTGTGTTGACGCAGGTGAAAGTTTCGGAACTTGAGGGCAAAGTTGTTGGCCTTTACT
TTTCAGCTAACTGGTATTCACCATGTACTAAGTTTACAAACCTGCTAGTCAATGTGTACC
AACAGCTCAAGGAATGCAACAATATCAATCTCGGTTTCGAAATTGTATTTGTTTCGTCCG
ATGAAAACTTAAATGCCTTCAATACTTATAGGTCATCAATGCCTTGGTTTGCAATTCCAT
TCTCTGATTTGGAAAAAAGGAGGGCCCTTACCCAAAAGTTTGATGTCGAAGGTATTCCTT
GTATGATAATTCTACAACCTAATGATGACAAATTAGACACTGCAGTTATTAAAGATGGAG
TTGAACTGGTGTATCGATATGGAGTGCAAGCTTTTCCGTTTACCAAAGAAAGGTTGGACG
AGTTACGAGAGAAGGAGAAGGAGAAACGTGACAACCAGACCTTGAGCAATTTGCTAACAC
ACGATGCCAGAGATGTTCTTTTGGGGAATCCTAGTCCTAAACAAGTTTCTGTTGCTTCTT
TAAAGGGGAAAACAGTTGGACTTTACTTCTCAGCTCAATGGTGCATTCCTGCGAAAAAAT
TTACTCCGAGGTTAATTTCAGTCTACAAAAAGATTAAGCAGCAGCTAGAGGGAAAGGAGG
ATGAGGATTTCGAGATAGTGTTCGTATCAAGTGACCATAACCAAGTGGATTTCACAACGT
ATTTCGAGACCATGCCCTGGCTAGCAATTCCATTTGATGATCCAACAATCAATGCTCTAG
CTAAGTATTTTGATATCCGAGGGATTCCGAGCCTAGTGATATTGGGTCCTGATGGTAAAA
CAGTGACCAAACAAGGTATATAGTATTATCACGTGTGACCATCTCATTTGAAAGCTTTCA
TTACTTAACTAATATTATGTCTCGACAGGTAGGAGCCTCATCAACTTATATAAAGAGAAT
GCTTACCCATTCACAAAGACTAGAGTAGGCATATTAGAGAAGCAAATGAATGAAATAGCA
AAAGGCCTTCCTAAGACTGAGAACCATTCGGGCCATCGACACGAGCTCACTTTAGTACCA
GAAGGCCATGGAGGTGGAGCTTTTATCTGTTGTGATTGTGATGAACAGGGCTATGGATGG
GCTTATCAATGCCTTGAGTGTGGCTATGAGGTACACCCCAAGTGTGTGAATCCCGTGCGC
CGCGACCCAGACAACTAATATATTGGGCTGATCATACGTTCTTACATGTTATATGTAGAG
ATAAATAGGTAAAAGGATACCATAATGTATAATTAGGTATAAAGCATGTCTTACTGACAT
GTTATTGTGAATTTTTAATGGGCCTTTGTTTATGGAATTCACAACTTGTAGTTGTTGGTT
TGAGAAGTCATCACATATGAGCCTTTGGAAAAATCACAAATGTACATAAAAATGTGTTTA
TTATACTCCAGGATGAGTCATTATCATTCTTTGTGCTATTATAATGAACATGTTATGAAG
TATGAATCCCCATCCCCCACACCCTTACACCTCAC
