Microarray Probes on PGSC0003DMT400025572
Probe ID | Chip | Probe Sequence |
---|
CUST_7762_PI426222305 |
JHI_St_60k_v1 |
GATTCTTGTCCAACATTTAAGTAGCTTCTTCTGATATATTCCACATGCAAAAGTCCAACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025572
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400025572 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G75900.1 |
+2 |
5e-90 |
280 |
150/287 (52%) |
GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:28499179-28500943 FORWARD LENGTH=364 |
Transcript Sequence (1207 bp)
>PGSC0003DMT400025572 1207 pgsc_dm_v3.4
TACAACTTAATCAATGAAGTTCCTTTTTTTCAAAATATGTTATTTTCTTGTTTTTTGTGT
AAGTTTTTGTTATGCCATAAGTATACCTCCTAATAAGTCTATTCCAGCATTGTTTGTTTT
TGGAGACTCTATTGTTGATACTGGTAACAATAATGGCCTTAAAACTATAGCTAAGGTTAA
TTATCCTCCTTATGGTAAAGATTTCATGGGAGGAATACCAACTGGAAGGTTTTCTAATGG
CAAAGTCCCTTCAGATTTCCTTGTGGAAGAATTGGGAATAAAAGATCTTTTACCAGCATT
TCTTGATCCAACTTTACAAGCAGAAGACCTCATCACAGGAGTTAATTTTGCTTCAGGAGG
TGCAGGATATGATCCTCTAACATCCGAAATCGCGAAAGTCATCTCATTGGATGGCCAAGT
GACATTATTCAAAGAGTACATAGTAAAGCTAACAGAGTTAGTTGGAGAAGATAGAAAGAA
TGAAATCTTGGCAAATAGTTTATTCATGTTGGTCACAGGAGCCAATGACATTACCAACAC
TTATTTCGGTACGCCTCTTCGAAAATCTTACTATGATGTTCCATCATACGCTGATCTCTT
GGTCAACTTTGCTTGCAGTTTTGTACAGGATTTATACGGTCTAGGGGCACGTCGTATTGG
TATATTTGGCATACCACCAATCGGATGTTTGCCTTCGCAGAGAACACTGAAAGGAGGAGA
AGCAAGACAATGTGTTGATAACTTGAACCAAGCAGCACAATTGTTCAACATCAAGTTGGA
AGCTTACTCAAATTCTCAGGGAAACAAGTTACCTAATTCAAGATTGGTGTATGTAGATAC
ATACAATGTTCTGCTTGATGTCATCGACAACCCTCAACGATATGGTAACTGTTTTTTTTT
TTCCTTGAATAGTTAAATGTACAAGATTTCTCATATATTTATATGATTGTGTAGGATTCA
AAATTTCAGACAAGGGATGCTGCGGGACGGGGAAAATAGAAGTTGCAGAGTTATGCACAT
ATACATGTTCCAGTGATTCTGATTATATTTTTTGGGATAGTTTTCATCTTACAGAGAAAG
CATACAGACTTTTAGTTCATCAGATTCTTGTCCAACATTTAAGTAGCTTCTTCTGATATA
TTCCACATGCAAAAGTCCAACAATATGTTTTTTTTTTAGGTGTACTCAAAGAGAAGGAGA
ACATTAG