Microarray Probes on PGSC0003DMT400025099
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48972_PI426222305 |
JHI_St_60k_v1 |
TCTAGACAAGCTTGGAGTATTGAATCTCTTCAGTACATCCAACTTGAGGGGCAGTATTGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400025099
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400025099 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G23160.1 |
+1 |
3e-51 |
187 |
87/183 (48%) |
cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | chr4:12129485-12134086 FORWARD LENGTH=1262 |
Transcript Sequence (1222 bp)
>PGSC0003DMT400025099 1222 pgsc_dm_v3.4
GTAATTTTGAGTGTTTAGATGATGCTCTGATTCTCTTTAAGCAAATGGTTACAATGAAGC
CTCTTCCTTCTCTTGTCAATTTTTCTAAATTATTTAAGACTATGATAAATTTGAGATCTG
CCCAGACCATAGTTGCATCTGTAGCATATACTATCCCACTAAGCAATTCCTTTGATACAG
TATTCATGATCCAAGCTAACACGAAGGCATTACATTTTTCTCACTGCTCTTCCAATTCTC
CCTCATAATCACTCCTCCTACATGTTCCTAATACAAACCCCAACTTACTTTTAGCCCTAA
GATTAATCATCATGGATCTGCTCCATAAAGAATAATTTTCAGTTCATGTAAGTTGCACGG
TGGTGAATATAGAGTATAGAGTATGATCAGAATTCACAAACCACTGATGTTTTATATGCA
GATGTTTCTAGATACCAAAGACTTGTGGGCAAGTTGTTATACCTTACCAATACAAGACCA
GATATAGCTTTTGCTTTACAGTCCTTGAGCCAGTTCATGCAACGACCAAAGATGTCACAC
TGGATTTCTGCCTTAAGAGTAATCAAGTATATCAAACTTGAACCTAGAAGAGGATTATTA
ATGAGTTCTGATAGCAAGCCCCATTTGACAGGTTATTGTGACGCAGATTGGGCTGCATGT
CCAAATACTAGAAGGTCTGTAATAGGTTTTGTATTGAAATATGGTTATTCACTCATATCT
TGGAAGTCCAAGAAGCAAAATACAGTGTCAAGGAGCTCTGCAGAAGCTGAGTACAGGAGT
ATGGCTAGTCTGACAGCTGAAGTAGTGTGGATTGCAAGTCTATACAAGGAGCTAAGAGTA
AAATTGATTGAACCAGCTTCTATATACTGTGATAGCAAGGTTGCTATACAGATTGCTGCA
AATCCTGTGTTTCATGAGCGTACTAAACACATCGAGATTGATTGCCATTTCATTCGAGAG
AAAATTAAAAAAGGTCTCATCCAAACTAACTATGTCAACACTAAGGATCAGCAAGCTAAT
TTGTTGACTAAGGCACATGGAAGATCACAGCATGAGTTTCTTCTAGACAAGCTTGGAGTA
TTGAATCTCTTCAGTACATCCAACTTGAGGGGCAGTATTGGAATTGATTAAGTGATTGAT
CAATTCTGTTAGTTAGGTAGTTAATTGATTAACTCTGATAGTTAGTGAAATGGTTAGTTT
AGGTGTTTAATTAACTAGTCTG
