Microarray Probes on PGSC0003DMT400024602
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42334_PI426222305 |
JHI_St_60k_v1 |
GTCTACTTTGTGCGCGCATAAGCACCTACTATGTTCTACTATAATTAGTATCTTTCTAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024602
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024602 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G17860.1 |
+3 |
2e-09 |
56 |
53/191 (28%) |
Kunitz family trypsin and protease inhibitor protein | chr1:6149343-6149933 FORWARD LENGTH=196 |
Transcript Sequence (774 bp)
>PGSC0003DMT400024602 774 pgsc_dm_v3.4
AAACAAGTCACAACTGAAACATGACCAAGTGTTTATTATTCTTCTCATCTCTTTGTTTGC
TTGCGTTTGTTGCGTTTTCATCAACTTCCCCTTGCCAAAATCCTCGTAATTCTAATAGGC
AAGTATTCGACACATTGGGTAGAGGAATTAATCCTCGTTCAAATTATCGTATTGCTTCGT
CTCTCGGAGGTGTCCTAAGTGGTCATGTATACCTAGGTCACATCCCAAATTCAGGTGCCT
CTTGTCCAGACGGCGTCTTCAAGTACAACTCCGATGGACAAAGAGGTACACCCCTTAGAT
TTATTGAACATTCTTGTAGAGGACAACCACCTCTCATCTATGAAAACCAAGACATTAACA
TCCAGTTCGTTGGTTCGAGGAATTGTGATAATTTTGTAAATTGGAAAGTGGGAGAATACA
ATGCAACACTAGAGGCAAGTTTGTTTGGGACTCGTGGAGGAACGATAGGAAGAGCAGATA
GTAGTTGGTTTAAAATAGTGAGAGCAGAAAGAGGTTACCATTTGTTGAATTGTCCTGGTC
CTTTTGTATGTCCAAATTGTGCTCTTAATCAATGTCGAGTAGTGTGGGTGATTGTGTTAG
ATGGAAGAAGGCGTTTGGCTCTCGCCACAAGACAAACGCCTTCTCAAGGGCTCCGTTTCC
CTCTTAGTGTCTACTTTGTGCGCGCATAAGCACCTACTATGTTCTACTATAATTAGTATC
TTTCTAAATAAAACTCTTTTATCATGCCAATGTTCTTTATCTCTCTAATTCATG
