Microarray Probes on PGSC0003DMT400024601
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42331_PI426222305 |
JHI_St_60k_v1 |
TGCCTGCTGGCCAGCTACTATGTTATGTTGTAAAATAAACACCTGCTAAGGTATATCTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024601
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024601 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G17860.1 |
+3 |
3e-14 |
69 |
63/192 (33%) |
Kunitz family trypsin and protease inhibitor protein | chr1:6149343-6149933 FORWARD LENGTH=196 |
Transcript Sequence (788 bp)
>PGSC0003DMT400024601 788 pgsc_dm_v3.4
CAAGCAATAAAATCAGTAGCTTAAACAAGATGAAGTGTTTATTTTTGTTATGTTTGTGTT
TGGTTCCCATTGTGGTGTTTTCATCAACTTTCACTTCCCAAAATCTCATTGACCTACCCA
GTGAATCTCCTCTACCTAAGCCGGTACTTGACACAAATGGTAAAGAACTCAATCCTAATT
CGAGTTATCGCATTATTTCCATTGGTAGGGGTGCCTTAGGTGGTGATGTATACCTAGGAA
AGTCCCCAAATTCAGATGCCCCTTGTCCAGATGGCGTATTCCGTTACAATTCCGATGTTG
GACCTAGCGGTACACCCGTTAGATTCATTCCTTTATCTACAAATATCTTTGAAGATCAAC
TACTCAACATACAATTCAATATTCCAACAGTGAAATTGTGTGTTAGTTATACAATTTGGA
AAGTCGGAAATCTAAATGCATATTTTAGGACGATGTTGTTGGAGACCGGAGGAACCATAG
GGCAAGCAGATAACAGCTATTTCAAGATTGTTAAATCATCAAAAATTGGTTACAACTTAT
TGTCTTGCCCATTTACTTCTATTATTTGTCTACGTTGCCCTGAGGATCAGTTTTGTGCAA
AAGTGGGTGTAGTTATTCAAAATGGAAAAAGGCGTTTGGCTCTTGTCAACGAAAATCCTC
TTGATGTCTTATTCCAGGAAGTCTAGTAACAAATAATGCCTGCAGCTAGACTATACTATG
TTTTAGCCTGCCTGCTGGCCAGCTACTATGTTATGTTGTAAAATAAACACCTGCTAAGGT
ATATCTAT
