Microarray Probes on PGSC0003DMT400024598
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42333_PI426222305 |
JHI_St_60k_v1 |
CTGCTGGCTAGCTACTATGTTATGTTATGTTGTAAAATAAACACCTGCTAAGGTATATCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024598
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024598 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G17860.1 |
+2 |
8e-14 |
68 |
60/187 (32%) |
Kunitz family trypsin and protease inhibitor protein | chr1:6149343-6149933 FORWARD LENGTH=196 |
Transcript Sequence (826 bp)
>PGSC0003DMT400024598 826 pgsc_dm_v3.4
CAATCAATAATACACAAATAAAATCAATATGATGAAGTGTTTATTTTTGTTATGTTTGTG
TTTGCTTCCCATTGTGGTGTTTTCATCAACTTTCACTTCCCAAAATCTCATTGACCTACC
CAGTGAATCTCCTCTACCTAAGCCGGTACTTGACACAAATGGTAAAGAACTCAATCCTAA
TTCGAGTTATCGGATTATTTCCATTGGTAGGGGTGCGTTAGGTGGTGATGTATACCTAGG
AAAGTCCCCAAATTCAGATGCCCCTTGTCCAGATGGCGTATTCCGTTACAATTCCGATGT
TGGACCTAGCGTTACACCCGTTAGATTCATTCCTTTATCTGGAGGTATATTTGAAGATCA
ACTACTCAACATACAATTCAATATTGCAACAGTGAAATTGTGTGTTAGTTATACAATTTG
GAAAGTCGGAAATCTAAATGCATATTTTAGGACGATGTTGTTGGAGACGGGAGGAACCAT
AGGGCAAGCAGATAGCAGCTATTTCAAGATTGTTAAATTATCAAATTTTGGTTACAACTT
ATTGTATTGCCCTATTACTCCCCCTTTTCTTTGTCCATTTTGTCGTGATGATAACTTCTG
TGCAAAGGTGGGTGTAGTTATTCAAAATGGAAAAAGGCGTTTGGCTCTTGTCAACGAAAA
TCCTCTTGATGTCTTATTCCAGGAAGTTTAGTAACAAATAATGCCTGCAGATAGACTATA
CTATGTTTTAGCCTGCCTGCTGGCTAGCTACTATGTTATGTTATGTTGTAAAATAAACAC
CTGCTAAGGTATATCTATCTATATTTTAGCATGGCTTTCTCAATAA
