Microarray Probes on PGSC0003DMT400024493
Probe ID | Chip | Probe Sequence |
---|
CUST_27419_PI426222305 |
JHI_St_60k_v1 |
CTTTGGTTTCTTCACCAACTCACAAGCATCTTCTCGCATCGTTTGGCTGTATAAATAAGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024493
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024493 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G22170.1 |
+2 |
2e-158 |
460 |
238/342 (70%) |
Phosphoglycerate mutase family protein | chr1:7826603-7828055 FORWARD LENGTH=334 |
Transcript Sequence (1714 bp)
>PGSC0003DMT400024493 1714 pgsc_dm_v3.4
TCTGGGAGAAATTTCTTGGGCTTTTCTTTCTCTCTTTTTCAAGAAAACGATTTCTCCTAA
GCATCCCATCATTTTCCCTCTTAATCTTGATTTGTCAGACACTTTTTACTCTATAAAAAC
TGAATCTTTATACCATTTGATGCATGTAATGTGAAGCATTTTATTTTCCATCTTCTTCTC
CGCCAACTTTTCTTGGTATATATAAACTCAACACCCTTTTTCGTTTTCCCCCATTTAACC
GCACCAAAAGAAAGAAAAGAAAAAGGGGGGAAAAACAAGATTTTTCTTGGGTAGCATCGT
TTCCATTTTCTATTGCTTTGGTTTCTTCACCAACTCACAAGCATCTTCTCGCATCGTTTG
GCTGTATAAATAAGCAATGGCTGCAACGACCCTTTACCAATCGGTTGGGACTCTTCAGTC
TTGTAGAAATAATGTCAACTCTGGATTGTGTCCTGATTATGGGCATGTTTCCTTTAGATC
GGTGTCCAAGGGTTTCAAAGTTGATGTGGGATTGTTGAGAGGAGGAAGTTTTTGTTCTAG
AAAGAGAAGTAGTTGTGTAATTCAAGCCTCTGCTTCTCAGGCTATGGTGTTTGATGAAGC
TTCAGCACCATCAAGTGCCACCACCAGTGACTCCAACAAGAAAACAAGTGAAGCTGCTTT
GATCCTGATCAGACATGGCGAGTCTATGTGGAACGAAAAAAACTTGTTCACTGGTTGTGT
TGATGTGCCTTTGACTACTAAGGGTGTGGAAGAGGCCGTTGAAGCTGGGAAACGAATTAG
TAATATACCTGTCGACATGATCTATACTTCTGCTTTGATTCGTGCTCAAATGACTGCCAT
GCTTGCCATGACTCAGCACCGCCGCAAGAAGGTGCCAACTATCATTCATGAAGAGAGTGA
ACAAGCAGGAGCTTGGAGTCAGATCTTTAGTGAAGATACCAACATGCAATGTATACCAGT
TGTAACAGCTTGGCAACTAAATGAGAGAATGTATGGGGAATTACAAGGTCTTAATAAGCA
GGAAACAGCTGATAAATATGGAAGTGAGCAGGTTCATGAGTGGCGTCGTAGCTATGATAT
TCCTCCTCCGAACGGCGAAAGTTTGGAAATGTGTGCTGAGAGAGCTGTTGCCTACTTCAC
AGAGCACATTGAACCCCAACTGGCAAGTGGAAAAAATATAATGATTGCAGCCCATGGGAA
CTCATTGAGGTCCATCATTATGTATCTTGACAAGCTAACATCCCAAGAGGTTATAAGTTT
GGAGCTTGCCACTGGAATCCCCATGCTTTACATATTCAAAGAAGGAAGGTTTATTCGCAG
GGGAAGTCCTCCAGCACCAACCGAGGCAACAGTCTATGCTTATACGAAGAAATTGGCTCA
GTACAGACAAAAGCTAGATGATATGTTTGAGTAACGTGACAAGGGGTTTGCTTTCAGTTG
AAGTAGATTTGATATGCCTCTTGAAGACTAGTTTCTCTTGCAAATGGGAGTGATTTGTTT
TTTCGTTTAATGTAGTCTTCGCATAGATAGGCCAAACAAACTCGGACACTTTTAGCCTTT
CATAAATGTTGTTCTATATGTGAATTGTAATGTAGAATATGTTGGTTTTGATCAGTATGA
GTAGACAGATTAAAGACAAATGAGCCTACTAGTGTTTTTGTTCATCTATACAGCTTATAA
ATAAGACAAATGTAGAATATACATGGGGTTTCTT