Microarray Probes on PGSC0003DMT400024479
Probe ID | Chip | Probe Sequence |
---|
CUST_27495_PI426222305 |
JHI_St_60k_v1 |
AAATTAGAATGGACTGTGAAGGTTGTGCTCGTAAAGTCAAGAATGCTCTCTCTAAAGTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024479
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024479 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G08570.1 |
+2 |
2e-54 |
177 |
89/151 (59%) |
Heavy metal transport/detoxification superfamily protein | chr4:5455123-5455975 REVERSE LENGTH=150 |
Transcript Sequence (888 bp)
>PGSC0003DMT400024479 888 pgsc_dm_v3.4
AGCAAATATAATCCACCACCAAAAAAACACAAAATTAATTTCTCATCCTTTCTCAGCTTT
ATAATTTTTAAAGTTAATTTCTTGTTTATATCAAAAGCAAAAAATGGGAGTTTCAGGGAC
ACTCGAGTACTTGTCTGAAGTACTTAGCAACGCTAAGAAGAGTAAGAAAAAGAAACAAAT
TGCAACTGTATCCATCAAAATTAGAATGGACTGTGAAGGTTGTGCTCGTAAAGTCAAGAA
TGCTCTCTCTAAAGTAAAAGGTGCAAAATCAGTGGATGTGGACTTAAAGCAACAGAAAGC
AACAGTAACAGGCTTTGTGGAGCCAAAAAAAGTGTTGAAGGCAGCACAATCCACTGGCAA
AAAATGTGAAATTTGGCCATATGTGCCATATAGTATGGTGGCACATCCTTATGCTGCTGG
TGTTTATGACAAAAAAGCACCTCCTAATTTTGTAAGGGCAACTACTGATCCTTCTGTTGC
TCACTTAAATCCTGTTGAAGAACAATATTCCCTTATGTTTAGTGATGAAAATCTAAATGC
TTGTAATATTATGTAGTAGTTAATTATAATTTTTTTTCTTTGTTATAAAGTATATATACT
TCTTTATGTGTATTTTTATGTATACTTAAAACCTGTTGAAGAACAGGTAGGCTATGATAC
ATGGACGTGCAAGTATTTTTATATGTTTCATAGAAGTATTTAGCTTTAACTTCATGTATC
TATTATATGTATTTAGTATTAATTTGATATATAAAGTATCAATTTCTTAGGATATATTCA
AAATACATGTATGTAGTATCAACATACATGCATGTATCTACATATGAAATGTAACTGAAA
CATATCAAATTACGAGTAAATCATGACTATAGAGTACTTGCCGTATCA