Microarray Probes on PGSC0003DMT400024347
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46693_PI426222305 |
JHI_St_60k_v1 |
TCTTGGCTGAGCTTACTATTATCAATCGTCTTCGACATAAACATCTTGTCAAATTGCTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024347
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024347 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G06740.1 |
+3 |
2e-130 |
418 |
246/623 (39%) |
Concanavalin A-like lectin protein kinase family protein | chr5:2084094-2086052 FORWARD LENGTH=652 |
Transcript Sequence (3679 bp)
>PGSC0003DMT400024347 3679 pgsc_dm_v3.4
CTCCATTTTTCACTCATTGATCAATTATTTTATTTGCATTTACAAAAAAGTAAGACAAAG
CCAACGTGCTTCAAAGTTTCTGCTCATTGATTCTTTCTTCTTCCCCTGTTTTCTTGCCCA
TCACCAAATCTACTTCCTCTGTAGCCACCACCATCTCTGAAGGGACTCACTGCTGATGAA
AAATGGGATTGTTAACACCAAAAACACTCACCATTTTCATCATTCTCTTCTCTTTACTAC
ACCTCAAACTTCAAGCTCAAAAAATGGAACATTACAACCTAGAATATGCATCTTTTGATC
AAACTTTCTTTGACATCTTTGAAGTTGAAAGTCCTGCAACAATCAGTAACTTTGCTCTCC
AAGTAACCCCTGATTCTGCTTCTTCAGATTTCAATCTCTACAATAACTCAGGAAGAATCC
TCTTTAAGCGACCATTTAAGCTCTGGGATGGTGATGTTTTAGACAATAAAACAAGGGTTG
CATCTTTCAACTCTTCTTTTCTTGTCAACATTTACAGACCAAAGAATGAAACAGCTGCTG
AAGGGTTAACATTCTTGATTTCACCAGATTTGGAGAAGCCCGATAATAGCCAGGGCCAGT
ATTTAGGGTTAACAAATGCTACTACAGATGGGAAATCTAGTAACAAAGTTGTTGCTGTTG
AGCTTGATACTTCTAAACAAAGCTTTGACCCTGATGGTAACCATATAGGTATTGATGTTC
ATAGTGTTAGATCTGTAAAGGTTGAATCTTTAACACCCCTTGGTATAGAACTTGCTCCTA
TGGGTGCAAGATTCTATAATGTTTGGGTACAATATGATGGAATCAAGAAAGTTCTTGATG
TTTATATTGTTGAACAAGCACAGAAAAATGGGTCTACCCCACCTATACCAAAAACCCCCA
TTTTAACATATAATCTTGATTTGAAAGAACATGTAAATCAAGAATCATATTTTGGGTTTT
CTGCATCAACTGGGACTAACTACCAACTCAACTGTGTATTGAGATGGAACTTAACAGTTG
AGTACTTCCCAGAAAAGAAAAGTCCTTGGTTGAAGATTGTTTTAGGTGTTGGGATTCCTG
TAGTGGTGCTTTTGATTCTTGCCGCGGCGTATTTAGGGTATTGTTATCATAAGAAAAGGA
TTGATAGGTCACAGTCTAACATATTGGGTGCACTCAAGAGCTTGCCTGGAACACCACAAG
AGTTTCAGTTTAAGGCTTTGAAGAAAGCTACAAACAATTTTGATGAAAAGAATAAGCTTG
GGCAAGGAGGATATGGAGTTGTTTACAGAGGATTTTTAGCTGGTGAGGAGAACAAAGATA
TTGCTGTCAAATGGTTTTCTAGGGAAAGCATCAAAGGGCAAGATGATTTCTTGGCTGAGC
TTACTATTATCAATCGTCTTCGACATAAACATCTTGTCAAATTGCTTGGATGGTGTCACA
AGAATGGAAAGTTACTGCTTGTATATGAATACATGCCTAATGGCAGTCTAGATATGCACC
TCTTTGCGGGACCAGATAAAGAGTCGTTGAGCTGGAACGTCCGCTACAAGATTGTTCAAG
GTGTTGCCTCAGCATTGCACTATCTGCACAATGAGTATGAGCAGAGGGTGGTCCATCGCG
ACCTGAAGGCGAGTAACATCATGCTTGACTCAAAGTTCAATGCGCGCCTTGGGGACTTTG
GCCTTGCACGGGCACTTGACAACGAAAGGACCTCGTATGCTGAGGCAGAAGGAGTGCTTG
GCACAATGGGATACATTGCACCAGAGTGTTTCCACACAGGGAAAGCCACACAGCAATCTG
ATGTATACGCGTTTGGGGCAGTGTTGTTGGAAGTTGTATGTGGCCAGAGACCTGGAACCA
AGATTAATGGCTTTCAATTCTTTGTTGATTGGGTTTGGTACTTGCACCGCGATGGCCGTA
TCTTGGAAGCTGTTGATCCAAGGCTTGGAGGTGACTATGTTGCTGATGAAGCAAAGAAAC
TTCTACTGCTTGGTTTGGCTTGTGCACATCCTATAGCTATTGACAGGCCTAAAACACAGG
CAATAGTTCAGATTATATCAGGGTCAGCACCAGCACCAGAAGTTCCACCATTCAAGCCAG
CATTTGTGTGGCCATCAATGATGCCAATTGACATAGACTCAAGTGTTATGGACACAACAT
CCATTACTACTTCTCACTTCAATTCAGGATGGAGTCTTGACTATCAAAGCAGGGAGACCC
CAACATATGCAGACCACTCTTTGGTGTAGTTACTTTGATGGTAAACAACTATTACCAAAA
GGAAAAATGATTTTTTTGGCCTTCTATTTTTTAAAAAATTTCCTGTAATTATGTTTTCTT
GGGAGGAGGTTAAAAATTTCCTTCAGTTTTTTATTTTTTGTTTGATGTTTTTTTCCCTTA
TCAATTTGTTATTGGGGCATGATGAAAAGATCAGAGCAACCCGTGTACATTCATATAACT
CAGTAGTGTTACATTATGTCATATTTACTGTTTTCCTGTCTTTGTCAACCAAAATTATGT
AAAAGACACTCATGTTGAGCCAAATTGGAGGAGACAGAAAATGAATAGTGGCGAAGTATC
TTTGTTGCCTCAATTGTACTACTACATACAACTTAAAGAATTCCAAGATCTCAAATTGTA
ATGAAAGATAAGAACTGATCAATTCTTATAAAAGCAATAGATAACAGAAGAACACAATAC
AAAGATGGATCATAGATGCTTTGTTGATATGCATAAATGCTCTGCCATTTTATAGGCTAT
TGTAGTATTAGATCGTTGACAATATATAGTAGATGAAATCCCACTAAGATTTATCTACTG
TCAAGATCATTTCTGTAAATCAATATAACGGAGAACCTGAGATGCTTGCCAAAGTTTTAC
AAGTTAGTGCGCATAAGATCAAGAGTTTCCCCCGCCTTTAACTTTGTTGATAAACGGAGC
TTCCTATAATCATTGAAAGTGAAAGGAACATAGATACGGGGGTGTTCAGCATCCACCAGC
TCAGGTGGTGGTTCCACTGCTGTGTCCCTTGGTCCCAAGAGGAATGAAGCAATAGACACC
CGTACTTTTGCTTCCTTGCATATCACTCTATGCTTGACAGTGTGTAATCTTCCATTGCTC
CATACCTTCACATAGGCCATAGCAAAAAGCAAGTATCATTGTCTAGTTCTTTTTTCGGAA
TCTTAGAAGGGTTAAGGGAGTAGGAATTATCTAACTTCCTGCTAAACAATCCCCGCCAGA
GGCTAGCATAAGATTGTTGGAACACGTCAAATCTTGAAAATGAACTAGGTAGAGTAGCAG
CATAGTTACCGTGCCCATGTCTCCAAGATTCACCAGGAGGGTGTTTGGCCAAGGATCAAC
TGCTACAAATTCACCAGACTTCTTCATGACCTCAAGACCGCCAACACTTTCATCATCCTG
TAGAATAGTAAGGAATCCTGAGTCTGTGTGTGTCTGAACCCCAGAGGAACCTACAGCTTC
TGGGGTGAAGTGGTACTTGTTAATCCTAAACTGACAAGGCCAATCCTCAAAGGAAACATT
TGGCAGTCCCAACCCTTCACTCATCTTTCGCAGAATGTCCATCATTAGTCCATTAGTTGC
TGCAGCATACGTCTTGATTGTCTCTCTGTTCACAGTAGGAATCAAACTGCTTTTAAGCAT
TCTAGTAAAGCAGTCTTTT
