Microarray Probes on PGSC0003DMT400024317
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19078_PI426222305 |
JHI_St_60k_v1 |
TGGATTGGATCGGATTATGGCGGCTCATATAACCGGCGAGTTGACTCCTGTATTGAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024317
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024317 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G28480.1 |
+3 |
2e-33 |
119 |
74/118 (63%) |
Thioredoxin superfamily protein | chr1:10013634-10014047 REVERSE LENGTH=137 |
Transcript Sequence (692 bp)
>PGSC0003DMT400024317 692 pgsc_dm_v3.4
CACAAATATATTTTTAAAAAAATATAGCTACAATTATTAATTTCATGATGCAACAAGCAC
TTCCTTACAAGTCATCATGTTTACCTATAACACTACGAGTTCATCCAAATGATCGTCATC
ATCGTGTAAGTACCAGCAATTCATCATTGTACGTTAAAGGTTCAAAAGAGGAATTGAATA
ACGTTGTTAAGGATAACGCGGTTATAGTTGTGGGAAGACGAGGTTGTTGTATGAGCCATG
TTGTCAAGCGTTTACTTCATTGTCTCGGAGCCAATCCTGCTATTTATGAAATCGAGGAAG
AGGACGAAAATGAAGTCGTTGATGAGTTGGAGAATATAATTGTCGCCGGAGGTGGTGATC
GGAAAGAGACCGGACGGTTGCAGTTTCCGGCGGTGTTCGTCGGAGGGGAGCTGTTTGGTG
GATTGGATCGGATTATGGCGGCTCATATAACCGGCGAGTTGACTCCTGTATTGAAAAAGG
CTGGAGCCTTGTGGCTTTGAATTATTTATTTCTCTTTTTTTTTTCTTTTCTTTTTTGGTG
TTTTGGGAAATAAATCAAACTTGGTAGATGTGGAAATACAAGATTTTAGTTAAGGGTAGG
TTCAATTTTTATAATACAATTATAAATGATGTTCCACTCAAGTTCGATATTCACTTAATT
TCGATTCTCACAGAAAAAATCTCACTTTAAAT
