Microarray Probes on PGSC0003DMT400024266
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18892_PI426222305 |
JHI_St_60k_v1 |
TGGGGGTTTTTGTGATGATGTTATCACCGGTTTGAGAAATATCTTGATAATAATAGCAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024266
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024266 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G20570.2 |
+3 |
1e-33 |
130 |
116/252 (46%) |
GBFs pro-rich region-interacting factor 1 | chr2:8855486-8857522 FORWARD LENGTH=436 |
Transcript Sequence (1139 bp)
>PGSC0003DMT400024266 1139 pgsc_dm_v3.4
CTTGACTTAGATTTGGTGTTAACAAAGAATTGATGAAAAATGTGCAGAAATATCGGTCCC
ATAGGAAACATTTGCTTGCAAGAGAAGCGGAGGCGGCAAGCTGGAGCCACCGGAGGCAAC
TCTATGGAGGTGCACCCGCGGTTGGAGGGGGCGGAGGAAAGAGAGAGATGAATCCGTGGC
CTGCACCAACAATTGGCTTTCCACCTCCTCCTCTTCCGCCCCCTATGGCACCTCCTATGC
CTCATCATTTTAGACCCTTACATGTATGGGGTCATCCATCTGTCGACCAATCATATATGC
ACATATGGCCTAAACATCTAGCACCTTCGCCGTCTCTACAACATCCATCACCAGCATGGG
CTCCTCCTCCTCATCTTCATCCTTCACCTCCTTCAGATCCTTCTTTTTGGCATCCACACC
ATCAACGGGTACAAAATTCTCTTACACCAGGAACTCCTTACTTTCCAGCACCCATAGCAC
CAACGAGATATCCGGCTGTTCATCATCCCGTACCGGGCATACCACCCGTATCGTCGCATG
GCATGTACAAAGTAGACCACTCTAATATTGGAGTTCGAAGTACCGCTACTCCTCCAGCAC
AATCTCTACCTAAACCTCCGTGCGACTTTCATCCTTCAAAGGAGAGCATAGATGCAGCCA
TTGGAGATGTTTTATCAAAGCCATGGCTACCACTTCCCCTCGGACTCAAACCTCCGGCCG
TCGATAGCGTGCTCGGTGAATTACAACGTCAAGGGGTACCTAAAATACCACCAACTTGTG
CATAGTCGTTTTTAATGAGGCAGCTAGCAAAACGCGGGTGGATTTTTTGGGGTTCACTTA
GGGTACGTAACTAAGTAGCCCTTCAATTCGACGACATTTCCTGCACTTATTTAGATGCAT
GAAGATGATCAATTCGATGTGGATCGTATATCATCATCAACATCATCGTCTAAATTAATG
CAGTTTTTTTTTTTACCTCAAATATATATATAAGAAAACTTTTAATTAATTTGTTCTTGT
TTTGCTATGTACAAGAACATGTTTTAACTTAACCGTTGGGGGTTTTTGTGATGATGTTAT
CACCGGTTTGAGAAATATCTTGATAATAATAGCAAGAGCTTCTTGTAATTAAACTTGTC
