Microarray Probes on PGSC0003DMT400024265
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18957_PI426222305 |
JHI_St_60k_v1 |
CATCAAGAATTTTGGAGATTATGGGAATTGATTGTCTCACTCGTCATAATATTGCCAGTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024265
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024265 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G20570.2 |
+2 |
1e-74 |
249 |
205/450 (46%) |
GBFs pro-rich region-interacting factor 1 | chr2:8855486-8857522 FORWARD LENGTH=436 |
Transcript Sequence (1945 bp)
>PGSC0003DMT400024265 1945 pgsc_dm_v3.4
CAAATATATATAAAAAAAACCATTTTGGGTATATTACTCTCTATTCCACTAACAAAAAAT
TCAACCATTTCCCTAGCTTCGCGTTTTTATAATAATTCTTTCCTCTTACCTCTTTTTGTG
CTCCGATTTAGGGCATGCAAAGCTAATTTCACAAGGCAAAAGTTCGATACACATATTTTT
TTTTATAATGCTAGCTGTGTCACCTTTTAGTAACACAACGGCAAGAGGTAATGAGATGGA
AGGTTTCGGGATAGGAGGAGGTGGAGGTGGAGGTGGAGGAGATGATTTCCCCGATTTCAT
GGGGGAGAATTTACTCGATAGCATTGATTTTGATGACCTTTTTGTTGGGATCAATGATGG
AGATATACTTCCCGATTTGGAAATGGATACTGAAATTCTCGCAGAATTTTCAGTAAGCAG
TGGTGATGAATCAGATGTGAACAATTATAGCAGTAGTAATAATACTTTTATTACTACTGC
TATAAAAAATGTAGAAAGAAAAGAAGAAATCGAAAAAACAGGCTCGTTTTCAGCATCAGA
TGTAGGTTCGGGTTTAACAACGAGCTTAAATCAAGGAGAAGAAATTGTTAGTACTCAAAA
AAGTGAAGAATCTACACTACAAGTGAATCAGAATATAATTACCCCAAAAGAAAGTGATAA
AGGTAAAAAGTCATCCAAGAATAATAATCTTCCAGGCAAGAGGAAAGTGAAGGTGGACTG
GACGCCAGAATTGCACAGAAGATTTGTACAAGCAGTAGAGCAACTAGGTGTAGATAAGGC
AGTCCCATCAAGAATTTTGGAGATTATGGGAATTGATTGTCTCACTCGTCATAATATTGC
CAGTCATCTTCAAAAATATCGGTCCCATAGGAAACATTTGCTTGCAAGAGAAGCGGAGGC
GGCAAGCTGGAGCCACCGGAGGCAACTCTATGGAGGTGCACCCGCGGTTGGAGGGGGCGG
AGGAAAGAGAGAGATGAATCCGTGGCCTGCACCAACAATTGGCTTTCCACCTCCTCCTCT
TCCGCCCCCTATGGCACCTCCTATGCCTCATCATTTTAGACCCTTACATGTATGGGGTCA
TCCATCTGTCGACCAATCATATATGCACATATGGCCTAAACATCTAGCACCTTCGCCGTC
TCTACAACATCCATCACCAGCATGGGCTCCTCCTCCTCATCTTCATCCTTCACCTCCTTC
AGATCCTTCTTTTTGGCATCCACACCATCAACGGGTACAAAATTCTCTTACACCAGGAAC
TCCTTACTTTCCAGCACCCATAGCACCAACGAGATATCCGGCTGTTCATCATCCCGTACC
GGGCATACCACCCGTATCGTCGCATGGCATGTACAAAGTAGACCACTCTAATATTGGAGT
TCGAAGTACCGCTACTCCTCCAGCACAATCTCTACCTAAACCTCCGTGCGACTTTCATCC
TTCAAAGGAGAGCATAGATGCAGCCATTGGAGATGTTTTATCAAAGCCATGGCTACCACT
TCCCCTCGGACTCAAACCTCCGGCCGTCGATAGCGTGCTCGGTGAATTACAACGTCAAGG
GGTACCTAAAATACCACCAACTTGTGCATAGTCGTTTTTAATGAGGCAGCTAGCAAAACG
CGGGTGGATTTTTTGGGGTTCACTTAGGGTACGTAACTAAGTAGCCCTTCAATTCGACGA
CATTTCCTGCACTTATTTAGATGCATGAAGATGATCAATTCGATGTGGATCGTATATCAT
CATCAACATCATCGTCTAAATTAATGCAGTTTTTTTTTTTACCTCAAATATATATATAAG
AAAACTTTTAATTAATTTGTTCTTGTTTTGCTATGTACAAGAACATGTTTTAACTTAACC
GTTGGGGGTTTTTGTGATGATGTTATCACCGGTTTGAGAAATATCTTGATAATAATAGCA
AGAGCTTCTTGTAATTAAACTTGTC
