Microarray Probes on PGSC0003DMT400024237

Probe IDChipProbe Sequence
CUST_249_PI426222305 JHI_St_60k_v1 GTTGCAATAATATGCCTCTGCTGTTTATTGGTGATGTTTTTCTTCCCTGCTTCCTCTCTA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024237

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Source Transcript PGSC0003DMT400024237 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG) Solyc04g076340.2 +3 5e-96 290 156/171 (91%) genomic_reference:SL2.50ch04 gene_region:58850229-58852842 transcript_region:SL2.50ch04:58850229..58852842+ functional_description:Unknown Protein (AHRD V1)
TAIR PP10 AT4G38060.2 +3 9e-16 75 41/88 (47%) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:17873709-17874379 REVERSE LENGTH=136

Transcript Sequence (1409 bp)

>PGSC0003DMT400024237 1409 pgsc_dm_v3.4
CTTAAGCATAACATGCCTGTTTTAATGTTTGTTTGCCATCAATTTCATTGTGTTCATTTT
CTTACCTTATCTGTCTTGGTATAGGAACAAATCACTCATTTAGTTTTTCATTGAGGTTCC
AGAATCTTGATACATCTGTCTGACTCTGTGTCCGGTGCCTGCATTGGATAAGTTCCTGGA
TATAGGAAGATATGGCCATGACATTTACCCCCTTGTCATGGTTGCTTTGGAGTGGAAAAC
ATCAAGAACCCAAAATCTCTAATGGTTCCTCTTTAAATTCATCACCTGATTCGTTATTGT
GGGAATCGGATACTTTGAAGTTTCCTCTTGATCGCAGGAGGGACATCGCTTCCTCATCAA
GAAGGGTTAAGCGAAAATGGCAGAGTCGTGAGGAACGAAAGATTGACAGGGAATATGATA
TTGTTATTGTGCCATCAGATGGTGGATGTGTTTCAGGGTCTGAGTCTGAGGATTCAGATT
GGTCAGTTGGATGGCTGGAGCCTCATGGACCTGGATTCAATAGTGATGATGATTTAGATG
ATAGCTTTGCTGTGCTTGTTCCCTGCTATGGCTATGGTTGTGCAAATGTGGAAGAAAATG
CACAAGATAAGTTTCTGCAAGCCATCGCAAACTTGAAGGACATATATGCTACTGAGAATA
AGAAGTATATGGAGCACTGGGTCTCATCTCTGAGGAATCACTGAAATCCAGCAGCGCCTA
TGGTGCTGATCAAAACTTGTTTTCTGCTGCTTATCATGATTCTATGTTGCAGTGGATCAA
ACTTGAGCTGTTATGGTTACTCACTACAAACTTAGATATGAACTCTATAGAAATATAAAG
ATATGATATCCTAAAACAAACAAAAAAATGTCTGGAAATAATGTATATTTGTAGAAAGAG
GAGTGAGTTTGAAGGACGCTAATATTTGAGGAGAAGAAATAGCAGACGATATAGGCATCT
GCTGCTTCCTATCCACTCTCAAAAAGAAAAGAAAAAAAGAAAAAACAAGAAAAAGGAACC
TCCCTTTCATATTTCGTGGATATTCTGGTATTTGATCTCCAGAATTGTCTCCGAAGATGT
GACCTCTGCTTGCAATGCTTCTTCATGAACATTGGTGTAAGTTTTCGATGTAAAGTGACT
GGAAGGAGACAGAAAGAAATGGATGATGGAGGACACAAAATTCTTAAGAAGAGGGAAAGG
CACAGCTGTGTGTTATGCTTGATCATTCTTTGATGTAAATATCTGTGAATATGTAAATAT
GTTCATCTAGTTGTAAATACGTCGCGTGAAGTTTGATAATCTTCATAAGTACTGTAAATA
ATTGTAAAACTCAGACAGCATTAGTTGCAATAATATGCCTCTGCTGTTTATTGGTGATGT
TTTTCTTCCCTGCTTCCTCTCTATATCCC