Microarray Probes on PGSC0003DMT400023727
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9178_PI426222305 |
JHI_St_60k_v1 |
ACTGTCAAGGCCGTTCGACGCAACTACTATGCAGTCAAGGAACTCATCAAAACTAGGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023727
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023727 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G14310.1 |
+1 |
0.0 |
803 |
408/544 (75%) |
pectin methylesterase 3 | chr3:4772214-4775095 REVERSE LENGTH=592 |
Transcript Sequence (2124 bp)
>PGSC0003DMT400023727 2124 pgsc_dm_v3.4
AATTTTTCCACAACTCTCCTTTAAATTTCTTCATCCAAAATGACACGTGTCAAAGATTTT
TTCGCCGAAATGTTGGATTCCGGCAAACAAATTGATTTTTCTAAAAGGAAGAAAAAAATC
TACTTGGCCATTGTTGCCTCAGTCCTGCTCGTTGCAGCAGTAATTGGAATAGTCGCCGGA
GTTAAATCTCGTTCGAATAACTCCGACGATCATGCAGACATAATGGCCATATCCTCTTCA
GCTCATGCCATCGTAAAATCTGCGTGTAGCAACACTCTACACCCCGAACTGTGTTACTCT
GCAATTGTAAATGTTACTGATTTCTCAAAAAAAGTAACAAGCCAAAAAGATGTGATTGAA
TTGTCCTTGAATATCACTGTCAAGGCCGTTCGACGCAACTACTATGCAGTCAAGGAACTC
ATCAAAACTAGGAAAGGTTTAACCCCACGGGAAAAGGTTGCGCTGCATGACTGCCTGGAG
ACGATGGACGAGACACTCGACGAGCTCCACACTGCTGTAGCAGATCTGGAACTTTATCCC
AACAAAAAATCATTGAAAGAACACGCTGAAGACCTGAAAACTCTAATAAGTTCCGCAATT
ACAAACCAGGAAACTTGCCTCGACGGTTTCTCTCACGATGAGGCCGATAAAAAGGTCCGC
AAGGTTTTGCTGAAAGGCCAAAAGCACGTGGAAAAAATGTGCAGCAATGCTTTAGCTATG
ATCTGTAACATGACCAATACCGACATTGCAAATGAGATGAAATTATCGGGCAATAGGAAG
TTAGTAGAGGATAGCGGCGAGTGGCCGGAGTGGTTGTCCGCCGGCGACAGGAGATTGTTG
CAGTCGTCGACGGTGACGCCGGATGTGGTTGTGGCGGCCGACGGAAGCGGAGATTACAAA
ACGGTGTCGGAGGCGGTAGCGAAAGCGCCGGAGAAGAGTAGCAAGAGGTATGTGATTAGG
ATAAAAGCAGGTGTTTACAGGGAAAATGTGGATGTGCCGAAGAAGAAGACGAATATTATG
TTTATGGGAGATGGCAGAAGCAATACAATAATTACCGCAAGTAGGAATGTGCAAGATGGC
AGCACTACCTTCCACTCTGCTACAGTTGCCGCGGTGGGGGAAAAGTTCTTGGCCCGGGAC
ATAACCTTCCAAAACACAGCAGGAGCCTCGAAGCATCAAGCCGTGGCACTTCGCGTGGGG
TCTGATTTGTCCGCATTTTATAAATGTGACATATTAGCTTATCAGGACACCCTCTATGTC
CACTCCAATCGTCAATTCTTTGTACAATGTTTAGTTGCTGGTACCGTTGATTTTATTTTT
GGAAATGGTGCTGCTGTTTTACAAGACTGTGATATTCACGCCAGGCGTCCTGGTTCGGGC
CAAAAGAACATGGTTACTGCCCAAGGAAGAACTGACCCCAACCAGAACACTGGTATTGTT
ATCCAGAAATGTAGAATTGGTGCAACGTCTGATTTGAGACCGGTGCAGAAGAGTTTCCCT
ACGTATCTAGGAAGGCCGTGGAAAGAGTATTCGAGGACTGTGATCATGCAATCGTCGATT
ACTGACGTGATTCAGCCTGCTGGATGGCATGAATGGAATGGGAATTTTGCATTGAATACT
CTGTTTTATGGTGAGTATGCAAATACAGGGGCAGGAGCAGCGACCTCAGGAAGGGTTAAA
TGGAAAGGGCATAAGGTAATTACAAGTTCAACTGAGGCCCAAGCTTATACTCCTGGCAGT
TTCATTGCTGGAGGTAGTTGGTTGAGCTCCACTGGCTTCCCTTTTTCTCTTGGTCTTTGA
AACGTAAAATGATATTCGAGGGAGTACTATTTTGTTTCAATTACTTATTATTGGTGCCAT
TTTTCTTTAGAGAAGTGGTTAGTTTGATCAAGCCGTGGAGACCTAGGGTGCAGGGCATTG
GCATTGCCATTTGGCTGACGGCAAAAATAACAAGATTCATCCACGAATTGGAGTATTGGA
ATTGTGTTTTATCAACTTCTATTCGTGTTGACGAATTTCAGTGATGTATTGTACATGTTA
ATATTAACTATTGTGTTTATCTCAAGTGAAAAAGCAAAAGAAAAAAAAAGAGAATTTATG
CTTATACTTGGCCTATATCCTAAC
