Microarray Probes on PGSC0003DMT400023624
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9211_PI426222305 |
JHI_St_60k_v1 |
TTATGACTCTGGTGATGATGACGACGAAAATAAATGGCACCCAGATCGCTGTTCAGCATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023624
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023624 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G14200.1 |
+3 |
2e-44 |
157 |
88/126 (70%) |
Chaperone DnaJ-domain superfamily protein | chr3:4712881-4714361 REVERSE LENGTH=230 |
Transcript Sequence (1325 bp)
>PGSC0003DMT400023624 1325 pgsc_dm_v3.4
CTTAAAACAGAGTATAATAATGCAAAAGGGCGAGGAACAGAGAGATGAAAGAAGCTTCTG
GATACAAATATCTCGTACCGTCATTGAATCTAAGCCGTTCATTCCTTAATCTAAGCCACA
CATTAGGGACTTCGGTGTATTAATGGAAGGCCCGTTTCTGGAGAGTTCTTTTAAGGGAGA
GTTGTTCATCTCTCTTCACACTTGTGTTTTCTCTCTCTAACTAAAGTTCCGTGTCTATAC
GGCTTTTAATTCTTTGAAGAAAGAAAAAAAATCTAATCACTTTTTGTATTAAAGGGGCTG
GAGATTTGTATTTAATTTGTCGACAAGACAGGAAATATTCTGATCGGTTTTTGGTGGGTA
TTGATCGAAATATGGGCAATGATTATTATGCAGTTTTGGGATTGAAAAAGGAATGCACTG
AAACAGAGCTTAGGAATGCTTATAAGAAGCTTGCACTGAAATGGCACCCAGATCGCTGTT
CAGCATCGGGGAATTCGAAGTTTGTAGATGAAGCAAAGAAGAAATTTCAGGCAATTCAAG
AAGCATATTCTGTGTTATCGGATGCAAACAAAAGGTTTCTGTACGATGTAGGAGTTTATG
ACTCTGGTGATGATGACGACGAAAATGGCATGGGTGATTTCCTGAATGAAATGGCAGCTA
TGATGAGCCAAAATAAGTCCAATGAAAATCAGGAAGAAACCTTTGAGGAATTGCAGGATA
TGTTTGACGAAATTTTCAATAGTGATAATGGGATGTCTTCTTCTTCTTCTTCTTCTTCTC
GGACTGGAACTCCTTCAATGTGTTCTACTACATCGTCTACATCTTCCAGTGAGACCTTTT
TTACCTTTTCCAACAAAAGAAGTTCAGGTGAAATGAAGTCGGGTAAAGGCGATTCTTGCC
AATTCCAAGGATTTTGTGAAGGGACAGGTGGAGCATCTGGAAAAAGCAATGAAAGAGAAC
GGAGTCGGAGGAAAAATTCCAAGAGTGGACGGAAGCAATAGGATGGATGCTAAAAGGCAA
AAGGTTCTATCATGAGTTTTATCAAAGGATAGGGAAAATGAATAGAGCTGCAGCTGCCTG
CTTAGTCCTGGTTTAATACAAGTCTTTTTGTGGCTGTTTGTTATTTAGGATCAGAGTTTT
TCCTTTTTCACAGAAAGTAGGATCTTCTTTCAACTAGTGTATTGTAATTCTATCTACCTA
AATGTCATTCAAAAGGTTTTCACCAGACACCAATTATCTTACCATTCCTAGTATTTCATA
GCGTAAATTCTTTCTTCAATGCTTAAAGACATATTGTATTGCTATTGAATCAAATGATGT
TTCCA
