Microarray Probes on PGSC0003DMT400023618
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9165_PI426222305 |
JHI_St_60k_v1 |
GGACTGTCGCTTTAGTATATGGATTCTTTAAACAGAACTTCTATATGGTTGGAAGAGATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023618
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023618 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G14205.1 |
+3 |
3e-126 |
415 |
231/395 (58%) |
Phosphoinositide phosphatase family protein | chr3:4716008-4720524 REVERSE LENGTH=808 |
Transcript Sequence (4315 bp)
>PGSC0003DMT400023618 4315 pgsc_dm_v3.4
AAAATATCAAATAAATAAAAAAGATATAGTAGTAATATTGCGTGTTTTGTGTGGATGTGG
TCACCGGAGCTCTACTCTTTTGCTTACCTCTTCGGATCTGAAATCTGCAAATCATTCTGC
AAATTTCTCTCTGAGTTGACTCTACCTCTACCGCCATTCTTGGCACCAGTTTTTTCTTGC
AATACTTCATTTCCTTTTTCTGCTTTAAATATCTGATTTCTTTTTGCACAGTTTAGTTTA
TAAGTTTTTCATTTTAGAGTATCAGTGTTGTCTTTTATCTGGGGAAGCAGTTTGGAAGTG
AGTTGCTGGTCCAGAGACTTGGGATCGGAAATATGGGTTCAGAAAGTCATCAACAATCTG
AAAACAATGAACACGAACATTCCAGACCTTTGTATCTACAAAAATTTCGCCTATACGAAA
CTACCTCGAACTTCTATATGGTTGGAAGAGATAAAACTAGAACTTATTGGAAAGTTTTGA
AGATAGATAGATTAGAGCCTACAGAGCTAATTATGTATGAAGATTCTGCCACATATTCAG
AGATTGAATGTATTGATCTACTTAAAAGAATACACGAAGGGAACAAGTCAACTGGAGGGC
TTAAATTCGTCTCAACTTGTTATGGAATTGTTGGTTTTGTAAAGTTTCTGGGACCTTATC
ACATGCTTGTTATTACGAAAAGAAGGAAGATTGGAGTAATATGTGGTCATGCGGTTTATG
CCATTACAAAGAGCGAGATGTTCCCAATTCCCAATTCTACTGTGCTATCCAAAATGCCTT
ATTCTAAGAATGAGAACAGGTCTTTTGTCAATTTTGCATGTAAATGTAAAATATCCATAG
TATTCTTGAGAAGACATTATAATGGAAATAGAAATGCTTCTAGTTTATTTGTATCTTTAT
GAGCATTATACTTGATGTGGTTGTTTCATTTTTCTGTTCTTTTATTTGGATGATTTTGAA
TTTTGTTATCTTTAAACTTGTCTCACTTTTGAGGTACTCTTCTATACTATCTTGAGAGCC
CCCCTGCAGTGTTGTCAACGCGTGGACAATATAGATTATAGTGAGCACATTATAGATGGG
CATTTTGTAGCTATACTATTGTAGAGCCTATTGCCAGTTTATTTACTATAACTTTACAGG
GCAAACTACAGTGGTGTTCTGATGTTATTTTTACATATTGAGTAAGACAAGGTATCATCA
GGATTTCAGTGGCACATGTGATCACCTTTTTTTGTTCATATTTCTTATGTCAACATTTCT
TCATTTTTAAAAAATATTTTCTTCTTTTATATACTGCATCTGATTTAGTAACTCATTTTT
GCCTCTTTTTTCTCCAATTATTTTGTGAATAGATACAAGAAGCTCCTGCACACAGTGGAT
CTCACAAGAGACTTCTTTTTCAGCTACTCCTATCATATTATGATTAGCCTTCAAAAGAAT
TTGAGTAATTGTCAGTCTGGACTCACGCTTTACGACACAATGTTTGTATGGAATGAGTTT
TTAACCCGAGGAATTCGCCATCAGCTCAAAAATACTCTTTGGACTGTCGCTTTAGTATAT
GGATTCTTTAAACAGGTTACACTTCCTCTTTCTGGTAGGGACTTCATATTGACCCTAATT
GCTAGACGATCTCGTCATTATGCTGGTACCAGATATTTGAAAAGAGGTGTAAATGAGAAG
GGTCGCGTAGCAAATGATGTCGAAACAGAACAAATTGTGCTTGAAGATGTGCCTGCTGGG
TGCCCGCTACAAATAAGTGCTGTTGTGCAGAATCGGGGTTCAATACCTCTTTTTTGGTCT
CAAGAGACTTCACGTTTGAATATTAAGCCTGACATCATACGTATGAAATAAGATACCTAC
ATTATTTTTGGAGGATCCAATTTACTCAATTTTCATGACCGTTTCTTTTTGTAGTCTCTA
GGAAGGACTTGAATTTTGAAGCCACCAAACGTCACTTTGAGAATCTTGTGAAGAGATATG
GAAATCCAATTATAATATTGAATTTGATTAAGACTCGTGAGAAGCGGCCAAGAGAAACAA
TTCTTCGTGCAGCATTTGCTAATGCTATTGAGTTTATAAATAAAGATCTTTCTGTGGAAA
ACCACTTGAGATTTCTTCACTGGGACCTAAATAAACACTCAAGAAGCAAAGCTACAAATG
TCCTGACACTCCTGGGCAAGGTGGCTGCTAATGCATTGGAGTTAACAGGCTTCCTTCACT
GTCAACTTATTCCTGCCTCCAAGACTGGGAAATTGCTAAAATTCTCGCCCATTGACAATA
CTGAAGATCAAGCTGGACAAGACTCCTGTGAAGTGAGAGCTGAACCGAATTCCCCTAGTG
GAGATTACCATGTCAACCTTTCAACACAACAGAGAGGGGTGTTACGAACTAATTGCATAG
ACTGTTTGGATCGCACAAATGTTGCACAATATGCCTATGGGCTGGTTGCCCTGGGCCATC
AGCTTCATGCCTTGGGCTTTATAGATGTGGAGAGTATTGATTTAGATTCCCCGTTAGCAG
ATAATCTAATGAAACTCTATGAAGAAATGGGCGACATACTTGCATTACAATATGGAGGGT
CTGCTGCACATAACAAGATATTTTCAGAGAGACGAGGCCAATGGAAAGCAGCAACTCAGT
CTCAAGAGCTTTTTAGAACGCTTCAGCGCTATTACAGTAATGCCTACATGGATGCTGAGA
AACAAGATGCCATTAATGTGTTTTTGGGACATTTCCGGCCTCAAGAAGGTAAGCCAGCTC
TCTGGGAATTGGATTCAGACCAGCACTATAGTGTTGGGGGGCATGCATCAAGTTTAGCCA
TGGAGAGTTCTAGGTCATTTATTAAAAGGTCGCTGTCAGAAGGAAACTTGATCTGCGGAA
GCAGCTCTCCTGTCAAAGAAACTGACACAGAGCAGACCGATGACTCTGACCAACCTTTGC
CTGAGAGTGCAAAAGGTGGTAGTAAGGGTCTTTCCGAGTCCACCCCAGAAATATCTACTT
GTGAAACTGATATGTCGTTTGCCAGGTAGCTTAGATTAAATTTTCTTTGCCACAGATTTA
TTTTGATTGAGTGGATACTAAGTGCTAATCATTGTGAGAGTTGTATCTCTTTGTGGTTCC
TTCATACTCCATCGACAAATCCGCTGCTGCGACTTTTGAATGTTATATGTATGGTTGTGT
ATTTTATGCTGGCCTTGTTTCTTGTTTTTGTCTCTTAGTAAATTGGCGCCTGTCTCCCTT
TTAATAGGTACACACCCTCAATGTCTGGTAGACAGCTTTTCCTAGATATGCAATTAGAGC
AGCGTCTCGGGAGTGGAAGTGTTAGATTGCGTGATCGTGTTGATTCAATTGATTTTTCAA
ATTTCCTAGATGTTGAGTGGCTCTCTTCGTCCGGAAATTCATGTGAAGAAGAAGCATTCG
AGAGATCTGCAATCATAGGTTCACCATGTTGTGTCCTCTCATCTGACTGTGTAACAGTTG
AATCTAAAGCTGAAACAAGCTCTTCAGTATTTGAGTCTTCAATCTTGAAGCGTCAGGAGC
AGACTAGTAGAGAGCTCAATTTTGATGCCAAAGGAAGTAGTAAACATATTGCTGAATTTT
CTGAGAAGTTTGTGCATTGGGTTAACAACGGAGATATGCTTTTCCCTTGAGATCATTTCT
GGTCTCCTTGAAGCTGTACTCTTCAGACAATTGCATTCAATCAAACCATCCGAAGGATGT
GGATGACTTACGGAATAAATGACAGGTGATGAAGATTAGGTAAGAGGGGAACAATGATTT
TTGTTAGAGAAAATATGCCTAAACAAAGCCATTGAGATTGTAAATTAAAGTACGCTAGAA
AATGATATAGAAAGTATAGAGTACATAGAAGCAGATGATTCTTTCAGTCGTTTTTTTGTT
TCTTCATTTTCTACCTTACTGTTTTTGTAGGTTTCAGTTCTGTAAATATCTGTTATAGTT
TTGTTAGTTGGAGCTCCATTATTCTTTTCTGTATACAAGCTTATTCTTGAGTGTAGCTGA
GAAGAAACTTAGATATTCCTATATACTATGAGGCTGCAATTTTTGTTGCCATGTCAACAG
AAGCATATCGCTTTCCTTGTAGTCATCGTGTCTTTGATGGCAGAAATTGTAGTGCACCTT
GTGTTATATCACGAGGAACATCTACAATTGCCTTGCAATTTGCTAGAAGGCTGGACTATA
GCAAATTTGTTATGCTAAGGCCAAAAAATCAGTAAAATTTGTACAGTCAGGACTCAGTTT
GTGATCAATGGCTCAGCAGATTCATAAATCTACCAGATTGTTCCCCTAACCCAAG
