Microarray Probes on PGSC0003DMT400023604
Probe ID | Chip | Probe Sequence |
---|
CUST_9423_PI426222305 |
JHI_St_60k_v1 |
TGTCCCATACCGTATGGGATTAAACAATGTGCTTAGTCAAAATCCTGACTTCATAAATTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023604
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023604 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G53903.1 |
+1 |
2e-11 |
61 |
31/60 (52%) |
Protein of unknown function (DUF581) | chr1:20132363-20132842 FORWARD LENGTH=126 |
Transcript Sequence (848 bp)
>PGSC0003DMT400023604 848 pgsc_dm_v3.4
CGTGTATCAAGTCAAAATGAGACAAACTATACAAATTGAAACACAAAACCAATCAACAAA
CTTAATTTCATCGATTTTCTTTATTTTGTTCGTATATCAAATTTTATTAGTGTATCAAAA
GTTAGGCCCCATCCCAATTATGTTTACCTAATGTCGGGCCTTCACCTTATATTGTTTACA
CTCTAACTGGCAAATTTTGGACGTGTGGGGGTGTTAGTGTCCCATACCGTATGGGATTAA
ACAATGTGCTTAGTCAAAATCCTGACTTCATAAATTAGTTTTTAAGATTGAATTTAGCAA
GGTTCATTTCTTTATCATGAAACGTTAATTAATAGTAATGTTTATATTAATTAATGCAGG
GGTGATCTTGGATTCTGCAGTGTGGAGTGTAGAAACAGGCAGATTTATTTGGATGAAATG
AAAGAACTTGAGACTTATACTAAAAATATGTTACGATCTTTTCGCCGATGTGGAGACGAT
AACCGCCGGCGGTGTAGTGAGGCTTCGGCTCTACTGGAGGAATACAATCAACGGCGAAAT
CCCCTAGCATATTCTAAGAAAAATACTCGACCTATATTTACATTATCATAATTCGAATTC
GTTTTGCTTTATTCCCAAATTCTTTTATTGGTTACAATAAAATTATTGAAAGAATATAGA
GCAAGTATTATTGATCTGACTATTCCATATATGTTTTGGATAAGAAATCTTTGATTAAAA
ACTAAAGAAATTTTGTTATTTTACGGTACTAGCTATTTAGTGATTTTGTTTTCGAAAATG
AGTTGACAAGCATATATTCGAGAAAAGTTATAATTAAAAGTGACAATATGAGCTGTCGAA
GATGTTGA