Microarray Probes on PGSC0003DMT400023517
Probe ID | Chip | Probe Sequence |
---|
CUST_22173_PI426222305 |
JHI_St_60k_v1 |
GATTCAAGAGCTGTGCTTTCACGTGCTGGAGTTGCAGTACCTTTGTCTATTGATCATAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023517
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023517 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G11410.1 |
+1 |
2e-74 |
244 |
160/360 (44%) |
protein phosphatase 2CA | chr3:3584181-3585649 REVERSE LENGTH=399 |
Transcript Sequence (1631 bp)
>PGSC0003DMT400023517 1631 pgsc_dm_v3.4
CTTCCTCTCTCTTTTGGACCGAATTACGCAAAATATCTACTACTACTACTACTTCCATTA
TAATCTTCGCAATGCAGTTATCGTCTTCGCATTAAAATGATTGATAACGTTAAAGGTTTG
CCGCCGGTAGCCGAAAAAGGTTGCCGGTTAACGGCGTTAGTGGATTCCGGCGGACTAGCA
GAAGTAGATCTGAGTGAGAAGGAGCCAAATTTCACTCGTCGTAGGCGATTGAATGAACGT
CGGTTGAAATCGTCGCCTGACCTACCGGAAAATTTCAATGTCTTCGCCGCTGATTACAGG
CATTATAAGAAGAAAAAACCGGAAAACAGTACCGTAACTGATACTGATGATCAAGTTCAA
CTAGCGACATCTAGTGAAGTGAAAAAAGTAAGGGAGAGCTTGGTCACGTGCTGTTCACAT
GGATCGATATCGTTGATCGGCCGGAGAAGGGAAATGGAAGATGCGGTGGCGATTTATCCG
AGTTTTTTCAGTGAAGGCAGCAGCAGGAAGTACGATTATTTTGGTGTTTACGACGGGCAT
GGAGGGTCACGTGTAGCGCACGCGTGCCGTGACTTTTTGCACCGTTTAGTGATACAGCAA
GTTTCGGAAGGAGAAGATTATGATGGGAAGAGTATTAATTGGGAGAATGTTATGATGGAG
AGTTTCCGTAAAATGGACGAAAAGGTGAACAAGGAAGGGGCGGAGATGGCGACGATAGGA
TCAACGGCGGTTGTAGCGGTGGTCGGAGAGGAGGAATTTGTTGTTGCGAACTGTGGAGAT
TCAAGAGCTGTGCTTTCACGTGCTGGAGTTGCAGTACCTTTGTCTATTGATCATAAGCCT
GACAGACCTGATGAGCTGGATAGAATTGAAAATTCAGGTGGGAAAGTCATAAATTGGAAT
GGACAAAGAGTCTTAGGAGTTCTTGCTACTTCAAGATCCATAGGTGATATGTACCTCAAA
CCATATGTCATTCCAGATCCTGAAGTCTTGGTTAGCCAAAGAAGTGATGAAGATGAATTC
TTATTACTTGCAAGTGATGGTCTATGGGATGTCATTCCAAATGATGTTGCGTGTGACGTT
ACAAGAAGATGCTTGAATGGTCAAACGTTCAGGAGGTGTGACCAACAAACCAAATCCCAT
AAGAGAGATGATCAGTCAAGTGAAGGTGTCAAAGAAAGTCTCGCAGCACGAGCAGCTTCC
TTCCTTGCAGAGTTGGCAATTGCTCGGGGTAGTAGGGATAACATCAGTGTAATTGTCGTC
GATTTGAATAGATCTGTATGTTCATCCACTGACTGAGCATAGTTAAGCTTCCCATACAAA
TGATAGGCAAACAATTTTATGGATGTCCACCAGGTTAGCAATGTGAAGGGATCTTTCCTT
TTGATTGCCTGCAGCAATACCATTACTTGCCTTCCTTGCTTGTTTGCGTAATTCTCCCCT
TTTCTTTGTAAAGCTTATGGTTTATTTATAGACTATTATTGGCCTTGGTCATTCACATTT
GAATGAGATTTCTAACAGATTAGTTGGGAGAAAAAGTCTCCACAGGTTAGTTGCTGCAAT
GGAAGTCATTTGTGAGACGGTGGCTTTGAAGTTTTCAACCTCCACCACCACTTTTTTTAC
TAACCCGATTG