Microarray Probes on PGSC0003DMT400023516
Probe ID | Chip | Probe Sequence |
---|
CUST_22265_PI426222305 |
JHI_St_60k_v1 |
AAGTCATAAATTGGAATGGACAAAGAGTCTTAGGAGTTCTTGCTACTTCAAGATCCATAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023516
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023516 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G11410.1 |
+1 |
2e-38 |
141 |
80/146 (55%) |
protein phosphatase 2CA | chr3:3584181-3585649 REVERSE LENGTH=399 |
Transcript Sequence (827 bp)
>PGSC0003DMT400023516 827 pgsc_dm_v3.4
CTTTCTGTTGACTGAGTTCCTGTATGGGCGCAGCCTGACAGACCTGATGAGCTGGATAGA
ATTGAAAATTCAGGTGGGAAAGTCATAAATTGGAATGGACAAAGAGTCTTAGGAGTTCTT
GCTACTTCAAGATCCATAGGTGATATGTACCTCAAACCATATGTCATTCCAGATCCTGAA
GTCTTGGTTAGCCAAAGAAGTGATGAAGATGAATTCTTATTACTTGCAAGTGATGGTCTA
TGGGATGTCATTCCAAATGATGTTGCGTGTGACGTTACAAGAAGATGCTTGAATGGTCAA
ACGTTCAGGAGGTGTGACCAACAAACCAAATCCCATAAGAGAGATGATCAGTCAAGTGAA
GGTGTCAAAGAAAGTCTCGCAGCACGAGCAGCTTCCTTCCTTGCAGAGTTGGCAATTGCT
CGGGGTAGTAGGGATAACATCAGTGTAATTGTCGTCGATTTGAATAGATCTGTATGTTCA
TCCACTGACTGAGCATAGTTAAGCTTCCCATACAAATGATAGGCAAACAATTTTATGGAT
GTCCACCAGGTTAGCAATGTGAAGGGATCTTTCCTTTTGATTGCCTGCAGCAATACCATT
ACTTGCCTTCCTTGCTTGTTTGCGTAATTCTCCCCTTTTCTTTGTAAAGCTTATGGTTTA
TTTATAGACTATTATTGGCCTTGGTCATTCACATTTGAATGAGATTTCTAACAGATTAGT
TGGGAGAAAAAGTCTCCACAGGTTAGTTGCTGCAATGGAAGTCATTTGTGAGACGGTGGC
TTTGAAGTTTTCAACCTCCACCACCACTTTTTTTACTAACCCGATTG