Microarray Probes on PGSC0003DMT400023467
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22210_PI426222305 |
JHI_St_60k_v1 |
TGGTTTTCATCTGTGAAGAAAGTTTTTAAACAGTCTCCTAAAGATTCACCAGACAAGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023467
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023467 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G49260.3 |
+1 |
1e-53 |
192 |
212/473 (45%) |
IQ-domain 21 | chr3:18262755-18265859 FORWARD LENGTH=472 |
Transcript Sequence (1845 bp)
>PGSC0003DMT400023467 1845 pgsc_dm_v3.4
TAAACAATTGGAAAGGTACTCTTCTTGATCTGACCCCGTGAGAATGATAAATACTAACGG
CAAAATAAGCAGGTTTGCACTTACTACTCTTTTTATTATCACCAAACTATTTTTCTCCAA
TCACTTTTTCTTTCTTTCTTCTTCAGCAACTTACTTGGGAAAGTTCTGTTTTTTTTGTTG
TTGTCTTGATGGTTATGATCTGCTGAATGTGTATGTTTTTTGTGACAGAAAGGTCAATTC
TTTTGGCTGAATATGGGCAAGAAAGGAAGTGGTTGGTTTTCATCTGTGAAGAAAGTTTTT
AAACAGTCTCCTAAAGATTCACCAGACAAGAAGAAGGAAACATTAGACAGCAAATGGCAG
CAACCTGAACCTCCTGAAGTTGTGTCACTTGAACATTTTCCAGCAGGGAGTTCTCCAGAT
CTTATTAGTAATGGAGGGAGCAACGTTGATTCATCGTCTACTGTAGCTGAGGATCATAAC
CATGCCATTGCTGTTGCAGCTGCCACTGCTGCAGCCGCTGAGGCAGCTGTTGCAGCTGCT
CACGCGGCTGCCAAAGTCGTCAGATTAGCTGGTGGCTATGGCCTCCTGCAGTCTACAGAG
GAAAGGGCTGCCACGCTTATTCAGTCATACTACAGGGGATATCTGGCAAGACGAGCTTTG
CGTGCTCTGAAAGGATTGGTAAGGCTGCAAGCACTAGTGAGAGGACATAATGTGCGAAAA
CAAGCACAAATGACCATGAGATGTATGCAAGCATTAGTACGTGTTCAGGGCAGAGTACGA
GCAAGGAGGCTCCAGTTAGTCCAGGAGAGGCTCGAGAGCAAGCTAGAAGAAGCACGAAGA
CACGCTGCTGAAGAACAACAACACAAGCACACCAGCCCCATCAAGAAGTCAGGGGCAGAA
GGTTGGGATAACAGGAACCAAAGCATGGACAAAATCCAAGAAAGCAGTAGGAGAAAATTC
GATGCTGAAATGAAAAGGGAAAGAGCTCTTGCTTATGCCTTTGCCTATCAGCAAAAGCAA
CAACAACTATTGCACATTGATCCACATGGTGATGACGCTGAATTTTTTGGCAATGAGCGC
GAAAAGTCACAATGGGGTTGGAGTTGGCTGGAGCGATGGATGGCTTCACAACCATACCAA
TACTCAAGACACATTGTGCCAAGAGACAGCTCCTATGTGACACCTTCCACAACAAGTGAC
ATGTCTGAAAAGACAGTTGAAATGGACCTAATCACCGGGCCATTGGACTCGGAGACCATC
AACTCAGCCCGTCACACTTTTGATCAAGCTGAAACAAGCCCATACTCAGCCCGGAAGGTT
GGTCACTCAAAATTTGATAATGTCCCTAGCTACATGACCCCAACTAAGTCTGCAAAAGCC
AAGGTGAGAAATCAAGGCCCTGTTAAGCATCGTAGCCCACCATCGGCCCAATGGAATGCA
TCGAAAAGGAAGGGAGCACACTATGGTTTGGGCCTTGAATCAAGTTCAGGGGCAAGTACA
ACAGCAATCTATCAAGTCTCAAGAAGCCCAAGCCCAAAAACTACCGCGAATCGCAGTAGT
GGACATGCTAATAAATGGATGGCAACTTACAGTCCGGAATCAAGTGGCGATGATCGGGCT
TCACCATTAGGACCACATCCCTGGAGATATAATTTTAGTTGATTTTTTTTTTTTTGGTGG
TAAATAAAGTACTGATAAAAAATGCTGTTGCTGTGTGCTAATAGCTTATTGTTTTTTGTT
TCTGTATCCTATTTTGAAGTTAATTTGGATGGTTAAATATGTATGAAGTTTGAGTTTTTG
CAATGGATGTAATATATGATAAGTGTAATGTTGTTTGGGATTAAG
