Microarray Probes on PGSC0003DMT400023427
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22285_PI426222305 |
JHI_St_60k_v1 |
CCTCTTCTCCAAGGAACTAGGGAACTCCTTTCTCCAAAATAATAATAATAACTATCCTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023427
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023427 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27940.1 |
+2 |
1e-165 |
485 |
274/418 (66%) |
manganese tracking factor for mitochondrial SOD2 | chr4:13904745-13907036 FORWARD LENGTH=413 |
Transcript Sequence (2016 bp)
>PGSC0003DMT400023427 2016 pgsc_dm_v3.4
GCTAATATTTAGGCGTGCCAAACAAGCCCTAATTTTAGAGAATTCTCTGGCCTTTACTGC
CCCGCGAGGCGTGGCAATTTTGGTTTTCCTCTTCTCCAAGGAACTAGGGAACTCCTTTCT
CCAAAATAATAATAATAACTATCCTTTTAATTTTTACTCCCTCATCACTGTTGAATCAAA
GCTCAGATCAACAGGTTGATCCATTGAGAGAAAAATGGTGGACGAATTGAAGCAAGGAGA
AAATTCATGGATAGACACGGCTGAGCAGTCGGATAGAGTATTGAATGTTGATAATAATGT
TTCCTTGATGTCTCAATCAATAGTTATCACTGATGGGGTAGAACCCTTACATCCTCAGCA
GCCTCCACCTCAGGGTACCAGCCCCTCCTCGGATGTCCGATTGGGCTTTCCTGAACGAGC
CATCTCAGCAGCTGGTGCAGCATTTCTCTCTGCTGTCCTTGTTAATCCACTTGATGTTGT
CAAGACTAGATTGCAAGCACAGGCAGCTGGAGTTGCTTATTCACATCCAATGAGTAACAT
GACTAGCCGCATGGCAGTTTTTGGGCCAAATATGATGTTTGCAGACCTGAGGTGTTCACC
TTCATGTACCCGAGCTGGTGTTCATGGTACAGTATCAATCTGCCCACCTGATTGTTTCCA
GTACAAAGGAGCACTTGATGTCTTCTACAAAATTATTCGGCAGGAGGGTATTTCTAAGCT
ATGGAGAGGTACAAATGCTGGTCTAGCTCTGGCTGTACCAACAGTCGGAATTTACTTGCC
TTGCTATGACATTTTTCGCAACAAGTTAGAGGAGTTCACAGCTCAACATACCCCAAGCTT
GACACCATATGCCCCTTTATTAGCTGGTTCTCTGGCACGGTCTTTAGCTTGCACAAGTTG
CTATCCTATTGAACTTGCCAGAACACGAATGCAGGCATTTAAGGATATGAACAAGAAGCC
TGCTGGAGTCTGGAAGACTTTGTTTGAAGTTATTGCCAATGTCAGGAGCACAACTAGTAC
CAATTTTGGCTTACAAAGTTATCGTGTACTTTGGTCTGGACTTGGGGCACAGCTTGCTCG
CGACGTCCCTTTTTCTGCAATTTGTTGGTCAACTCTTGAACCGGTAAGAAGGCGGCTTCT
TAGTCCGCTGGGAGATGAAGCTAATGCTGTCGGTGTCCTAGGTGCAAACTTTTCTGCTGG
TTTTGTTGCAGGAAGCATTGCTGCTGCTGCAACATGTCCCCTTGATGTTGCTAAGACTAG
AAGACAGATTGAGATGGACCCTGCCAGGGCGTTGACAATGACGACAAGGCAAACTCTACT
TGAAATTTGGAGGGATGGAGGGCTCAAGGGACTGTTTACTGGAGTAGGTCCTCGTGTTGG
TCGTGCTGGCCCTTCAGTTGGAATTGTAGTTTCGTTTTATGAAGTTGTCAAATATATGTT
ACACCAACAATATGCTTCTTCATAGGGAGCATAGTGTCATGTCCCGCCACTATCCGAGCC
AAATTTTGCAGCCAAGTAACTCTAAGTCCGTGACAATAGTCAGGTTAATTAGGTTTTTTC
TTTCCAACCTCTTGGATCGGGCAATGGTCGCTGACATAACTGATTCGGGCCATGATTCTG
ACGCTGGAGCTCTAATGTGGATATGGTAGCACGCAAAGGAGCAGTTTTGACCATGGTAGA
TTACCCACACAGGTTAGCTTGTAGAAAATAATCCACTCTTCTTTTGCTTTCCAGCCAATT
TTGGTTGGTTTTTCGGCAGAATTGTCTTTGGACTAAGAAGAGATTTTGATATACTTTGGT
TGCATCAATGAGCAGTTTTTCCTGAGATGTTCTCAGTTATCATAAAAATGTTCAAGTTCT
TTATTTCTTTTATTATTTGTCTGGGGATATCAAGCTAAAATATTGATGCTGAAAGATTTT
TATTTTTCATTACCATAAAATATTGTCTTGATCTTCTTATGTTACATTGGTACATTTTAT
CAACTGGTGATGACTTAATTGGAAAGGAAAGAAAAA
