Microarray Probes on PGSC0003DMT400023345
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19620_PI426222305 |
JHI_St_60k_v1 |
TGGGTGGAAGGGAACACCAATTCATTCTCTATCTATTTGGAAGTTATTGTAAATGACCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023345
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023345 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G03450.1 |
+1 |
2e-46 |
172 |
112/366 (31%) |
RGA-like 2 | chr3:819636-821279 REVERSE LENGTH=547 |
Transcript Sequence (1755 bp)
>PGSC0003DMT400023345 1755 pgsc_dm_v3.4
ATGACCAACGTCTCAATCTCCAATGATATTTTTAGTGATTTCCAGGATGATCAGTTTCAT
CTTAAAGGATATGAGAGAAGTGAATTAGTGGTCAATGGCATCGAAGAAGATTGTGTAGAT
ATTGATTCTCTTTACTCCATTTGTGGCCTTAACAATGAAGAGAATACATCTGATGAACAA
GTTAGAACCAACTTATTGGAAGATCAGCAACAAAGTCTATCAGATTGGACGCAAAATCAT
TTCCCCACCAACACAGTCATGCCCTTGCAACCGGTTCAAATCCAATCCACTATTGAAGCA
CCAAAGAATGATGATTTCCGGCCTCAAGTACCAGAACCTGGCAACTCTAGCAATGAAAAA
CCAAAGCCGTTTTCATTAGCATCTTTGGAGCTACTGAGCAATTATGGCAGACTGAGCAAG
AAATCGAGTGAGGAAAACTTGAGCACTAATGCACTAAGTTGTGAGGCTCGCTTAGGTAAC
AGCCAAAAGTTGCCAATGGAAGAGATCTTGAGGGCTGCTGGAGAAAGGTACATACAGTAC
TCCACCCAAAGGCTAGATGGTCTTTCTATGTTTATCCACCCTTATGGTTCGGCACTCTCA
GGCCTTTGTATGGAGGAAACAAGGGACGTGGAACTTGTCCACCTCCTCCTAGCTGCAGCA
GAAGAAGTGAATAATCAGCAATTCCATCTAGCTAGCAAATTGATTTCTCGTTGTATGTGG
GTGGCATCTGATTCAGGTAATCCAGTCCAGAGACTTTCTTTCTATTTTGCTAAAGCTTTA
GAAGAAAGGATTGATCGATCAACTGGAAGATACACATGTACGGATGAAGATCGCCACCTC
AAGTATATAAAAACTATGTCATTAGGTACCAACTATGCATTCTTGACCTGCCACAAACTA
ATTCCCTTCAGTCAAGTGATGCAATTTGCAGGAGTTCAAACAATTGTTGAAAATGTCAGA
AGCGCAAAAAAGATCCATTTGATTGATTTTAATATCAGAAGTGGAATTCAGTGGATAGTC
TTGATACAAGCTCTTGCAGAAAAAGGTGACAGTCCAATTGAACTTCTTAAGATAACTGCA
GTTGGAAGCACAGAAAAAGAGAACTTTGAAGTAACAAGCAACACATTACACAGTTTCGCC
AAGTCCTTAGGTCTTTCATTTTCATTTGATATAGTTTTTGTCTCGGACATGAAAGATTTC
AAGAAAGAGTCGGTCAATATTAAAACAGATGAGACTGTGGCTGTTTATTGCAACTCTGTA
CTAAGGACAATGCTACTAAGACCAGATTGTTTGGATAATTTGATGAAAGTAGTCAGAAGT
ATTGGACCAACAATTATTGTTGTTGGCGAAGTTGAAGCAAACCATAATTCACCATCATTT
TTAAACCGCTTTATTGAGACACTTTACTTTTACAGTGCATTTTTTGATTGCTTCGAGGAC
TGCATGGATCGAGGCAGTCCATGTCGAACAACGATTGAAGGGGTGTATTTTGGTGAAGGT
ATTCGGAACATCGTGGCGGCTGAAGGGGAGGACAGGTTCACCAGGAATGTGAAGCTTGAA
GTATGGAGAGCATTTTTTGCAAGGTTTGGTATGGTGGAAGAAGAGCTTAGTGAGTCAGCT
TGGTATCAAGCTCATCTGATTCTCAAGCAATTTGGCCAAGGCAGTTCTTGTGATCTTCAA
AAGGATGGGAAAGGCCTCATTATTGGGTGGAAGGGAACACCAATTCATTCTCTATCTATT
TGGAAGTTATTGTAA
