Microarray Probes on PGSC0003DMT400023251
Probe ID | Chip | Probe Sequence |
---|
CUST_19609_PI426222305 |
JHI_St_60k_v1 |
AGATTGTATGCTCAGATGTCTTATTTGGGAAGTTTGGCTTATGGAATACCCCAAATTAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023251
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023251 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G02660.1 |
+3 |
3e-178 |
536 |
359/581 (62%) |
alpha/beta-Hydrolases superfamily protein | chr1:572187-574746 REVERSE LENGTH=713 |
Transcript Sequence (2712 bp)
>PGSC0003DMT400023251 2712 pgsc_dm_v3.4
TTTGGAGAAAAAATATCGTTTTTTCCTTAACGTGAACAAAACCTGAAGAGTTTGTTCACC
TATTTATTTGCAAAAACTCACAAACCCAACACCTTTAAATTCTCTCAAATCTTGATTCTT
TATACAAAAAATTCAAAGATTGTTGCTTTACTTCAACAACCCATTTTCATACTTGAACTC
TTAACTTTACATATTTGATTCAATAACCCAAAAAAGAAAGGAGAATTTGTGAATAACTTT
GTAGGATTTGGAAAGGGGTTCTACAAATGGATGGTCTTTGTTTGACAGGAGGAGGGATAC
AGGGTATGGCGGGGCCTATTGCCGTTGCCGGTGGTGCCGGAGGTTTAGATGTACGATCGA
CCCAGTTTAGTACATCGGCGGTTGGACGTTCGTCGGCGTCGATGTCGGTTGAAAAGACAT
CTTCTTATAGGAATAAGTCATGGGGGTTTTCGTTTAGGTACCCACTTAGATCTTTTTGGT
CTGGAGGTAAAGGAAGGTATGATGCTATAGCGGTAGACGACGCTGTTTTGATGGAGGAGA
ATGAGGAGAAGAATGAGGATAAAAATGAGAATTGGGTATTGAAGATTTTGCATATTAGGT
CTTTGCAGAAGGAGAAGGAGGTAGGGGAAAAGGGTGGGGGTGATGAAGATCTGGTGGAGA
AGGTGGAGGGAGAAGGTGGTGATGAGATTGAAGATGATAGTGAAGGGCATAACAAGTATG
ATGATGGGGATGAAGAAGAATGTGATGTGTGTTCTGTAGATGATGATGAAAAATTCAAAT
TTGATAGAAATTCTTTTTCAAAGTTGCTTAGGAGGGTCACATTGGCTGAAGCTAGATTGT
ATGCTCAGATGTCTTATTTGGGAAGTTTGGCTTATGGAATACCCCAAATTAAGCCAGAAA
ATTTATTGAGGAATCATGGATTGCGTCTTGTTACATCTTCATGTGAGAAAAGAGAGCATG
CGTTAAAAGCTGAGAAAGAGAAGGCAGCAGCTGAAGATCAGGAGAAAAAAGAGAATGAAA
ACGCTCAAACTCAGGGAGAAGAAAGAAGCACTACAACTTCAGTAGAAGGGAATGGAGAGA
CCAGCGGGAACAGGATAAGTGCATCCACAGCTTACCATATAGCTGCCTCTGCCGCGTCTT
ATTTGCACTCTCATACAATGAGCATTCTTCCTTTTAAATCCTCCAAGACTATGCCAAATA
ATGATTCCTCTGAAACAACCGTCGGATGTGATGATAATATAGATGCAATGAACAGGGAAG
TTGCTTCTTTTATGGCAACCAGTGACTCAGTGACATCAGTAGTTGCTGCAAAGGAGGAAG
TAAAGCAGGCTGTTGCAGACGACCTAAATTCAAATCATTCTTCACCCTGTGAATGGTTCG
TTTGTGATGATGATCAGAGCTTGACAAGATTCTTTGTAATTCAGGGATCAGAGTCACTAG
CATCATGGAAGGCAAATCTACTCTTTGAACCTGTTAAATTTGAGGGTCTGGATGTGATGG
TCCACCGAGGTATTTATGAAGCTGCAAAGGGCATGTATGCACAGATGCTACCAGAAGTAC
GTTCACACCTTAAATCTCATGGTAGTCATGCCAATTTCCGTTTTACTGGGCACTCTCTTG
GTGGAAGTTTATCATTGCTCGTCAATCTCATGCTGATCATAAGGGGAGAAGTTCCCCCAT
CTTCCTTGCTTCCCGTTATAACTTTTGGCTCACCATCAATAATGTGTGGAGGAGACCGCC
TCCTTCGCCTCCTTGGCTTGCCTCGTAGTCATGTGCAGGCAATCACAATGCACCGAGACA
TTGTACCCCGAGCCTTCTCTTGCAATTATCCCAATCACGTAGCAGAGTTTCTTAAAGCTA
TCAATGGAAACTTCCGCAATCATCAATGTCTGAATAACCAGAAGTTATTGTTTGCTCCAA
TGGGTGAATTCTTAATTCTGCAGCCAGATGACAAGTTTTCTCCAAACCATGACCTACTAC
CTTCAGGTTCCGGTCTGTATTTACTGAACTGTCCTGTATCAGATTCAACAGAGGCAGAAA
AACAACTTCAAGCCGCTCAGTTTGTGTTTTTAAACTCACCCCATCCACTCGAGATCCTAA
GTGATCGCTCTGCCTATGGTTCTGGAGGAACAGTACAAAGAGACCACGACATGAGCTCAT
ACTTAAAATCAGTTAGAAACGTAATTCGTCATGAGCTGAACAACATCAGAAAAGCTAAGA
GGAAGCAAAGGCGCAGAGTTTGGTGGCCATTGGTTTCACCAAGTGGGGTTAATGCTGGTA
TTGTTGTTAGAAGGTACGTTGAATCAGGTAGTATGGGCCATGGCCAGGTCAACTTTGCTG
GCATCTTACAAAGTGGGAAAGAGTCGTTGAAACGATTCAGTACACTAGTTGCATCACAGC
ACATGCACTTGCTTGTGGTGCTTTTGTTTCCTGCACGGTTACTTATTGTGGGGACTTTCA
GCATGTTCAATTTTCGTTGAATCCCCAGAAGCATTACACATTACACAAGTTAAGAAGGGT
AGATGATTCTTTATTCATTGACTACTACTGTTCCCTGGTTTTCTCAAAAGGGAACTTCCT
GGATGAATGAAATCCAAATAGATTTACAATTTGGATCCATTTGTCAATTGATAAATTCCA
TTTATGGAATGAAAAGATGTATACTTTTGTAGTACAATGTTTTGTGTAGTAATGATATAT
AGTCTCTTCTTC