Microarray Probes on PGSC0003DMT400023192
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19492_PI426222305 |
JHI_St_60k_v1 |
TTATTTTCGCTTGCTTTGTTAGTCCCAATATGGTGAGACTTCTCGCCAATGGAGTCACAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023192
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023192 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G03230.1 |
+1 |
3e-101 |
314 |
185/414 (45%) |
Eukaryotic aspartyl protease family protein | chr1:790110-791414 FORWARD LENGTH=434 |
Transcript Sequence (1489 bp)
>PGSC0003DMT400023192 1489 pgsc_dm_v3.4
TTTAATTGTGCCATTTGCTTTCTTTCCTTCTATAGCATAATGACATTCAAATTTCCTTTG
TCTATGCTTCTCTTATTTCTTCTACTCAATATTTTTCTCTGCTCATCTGAAGTACTATAC
CTTCCCGTCACTAAAGATGCATCAACTCTACAATACATTACAGAAGTAAGTCAAAGAACT
CCTTTAATTCCCATAAAACTTTTAGTCCATCTTGGTGGAAGAAGTTTATGGGTGGATTGT
GACAAAGGTTTTAAAAGTTCAACTTACAAACCAGGTGTATGTAATTCTACACAATGCACT
TATTCCAATCCTAATTACTGTGGTGACTGCATATTGAAACCAAAATTGCAGCCTGGATGC
AACAACAATAGTTGTTACATTTGGGGTGAAAATCCCTTGATCGATTGGTTTGACGATAGC
GCTGAAATTGCTGATGATGTATTGGTTATTGGTTCAACTCCTGGTGTTCGTGTAACTTGG
CCGCGGTTTATTTTCGCTTGCTTTGTTAGTCCCAATATGGTGAGACTTCTCGCCAATGGA
GTCACAGGAATTGCAGGTTTTGGACGTGAAAGTCCAATTTCCATTCCAAATCAACTTGCT
TTAGATCCTAGATTCACCAAGAAATTTGGTATATGTTTGAGCTCATCTACAACATCTCGT
GGAGTTATATTCATCGGTTCTGGTCCATATTATGTTTACAATCCTAAGAAGATCGATATC
TCAAACAATATTCTCTACACCAAATTAATCGCAAATAAAAATGCATTTTTGGTAACTCAA
GAGTACTATATCCAAGTTTCATCCATTAAAATTGCGGGACAAGATATTCCACTAAATAAA
ACATTGCTATCTATTAATAAAAAAGATATAGATGGTGGGACGAGAATCAGCACAGCGTCA
CCTTACACAATTTTGCACCCTAGCATTTACGATGCTTTTAAAACTGCTTTCATCAACGCG
CTTCCAAAGAATGTGGCACTTGTAGAGTCTCCTATGAAACAATTTGGACTTTGCTTTAGT
TCGAAAAACATTAAAAGTACCAACGTTGGACCAGCTGTTCCTGTGATAGATATTGTGTTG
CACAAGCCGAGTGCATTTTGGAGGATTTATGGAACAAATTCAGTGGTACAAGTTAGTAAG
GATGTTATGTGTTTAGCATTTGTGAAACAAGATGAAGAAAGGGAACCATCAATTGTTATA
GGAGGACATCAATTGGAAGAGAACCTATTGATATTTGACCTTCCTGGAAAGAAGATTGGT
TTCAGCTCATCACTTAAACTTCAACAAACATCATGCTCTCAGTACGACAATACCATTCTA
GGCTAAGCCCCTCTATTCTATATATGTAATTTTCTATTTCAATAATAAACTAGATGGTCG
GTGCCCGTGCATTGCATAGGCGTATGACTTATATCGTTTTATATGTTATTCTTCATAATT
TCCTATTTGGATAATAAATTAGATGTTCTAACTTCTATATACAATTGAT
