Microarray Probes on PGSC0003DMT400022365
Probe ID | Chip | Probe Sequence |
---|
CUST_50593_PI426222305 |
JHI_St_60k_v1 |
ATAAGGATCATGACATAGTACTCTGCAAAGTGTATAGAAAGGCAACCTCCTTTAAAGTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022365
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022365 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G17040.1 |
+2 |
3e-75 |
236 |
109/163 (67%) |
NAC domain containing protein 36 | chr2:7407123-7408120 FORWARD LENGTH=276 |
Transcript Sequence (984 bp)
>PGSC0003DMT400022365 984 pgsc_dm_v3.4
AAAATACATCCTCTAAGAAACAAAAAATAAAAAAATGTCATTAACAGAGCTTGAACTTCC
TGGGTTCCGTTTTCATCCCACTGAAGAAGAACTTATCAATTTTTACCTCAAAAGAATTAT
CAATGATGATAAAATCGATTCTAATACCATTGGTTTTCTCAACATATATCTCTATGATCC
TTGGGAGTTACCTGGGATGGCAAGAATAGGGGAAAGAGAGTGGTATTTTTTTGTACCAAT
AAACAGGAAACATGGTCCTAAAGGGAGGCCCAATAGAACAACAAGAAGTGGTTTTTGGAA
GGCAACTGGTTCTGATCGTCAAATTCGTTCTTCATTAGAACCAAAAAAAGCCATTGGTCT
TAAGAAAACTTTGGTTTTCTATGGTGGAAGGGCACCTAAAGGCACCAGAACAGATTGGGT
CATGAATGAGTACAGACTTCCTCATGGACATAAGGATCATGACATAGTACTCTGCAAAGT
GTATAGAAAGGCAACCTCCTTTAAAGTATTGGAGGAAAGGGCAATGATTGAAGAAGATGC
AGCAAAACCATATTTGGCATCAGCTGCTCCTCATGATGAATCACAGGACATGCTTGTTTC
TTTGGAATCATCATCAAAAAATGACATGTATTTCAAAAGTTGTGAAGAAGAAAATCATGA
ATTGTTAGGATCAAATGCATTTGTGGAACCACCCAAATTTAGCATTGACTCATTGTCAAG
TCCTCTTTGGAGTACAGGGCAAGACTTGTGGACTCTATTTTCTTTGTCCTGAAAATAAAA
TCACCTAGTACTATTTCAATATGGAAAACTTTAGTAATTGCATCCTCTAATGTTGGAATT
ATTGACTTTGTGGAGAATAATTGTAATCTGATAGTTTCATGTTCCCTAATTCTTTGGGTT
ATGATTGAAATCAATTGTCATACAGTCCATCCGTTAAAAAGGACCCGTTTGACCCAAAAA
TACTTGGGAAGTGGTGTTTGCCCC