Microarray Probes on PGSC0003DMT400021966
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36163_PI426222305 |
JHI_St_60k_v1 |
AGTTGTTGGTTGGATTTGTGTAACCGTAGCAGTGGGTGTTTTTGCAGCACCTCTTAGCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021966
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021966 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G13170.1 |
+3 |
2e-38 |
141 |
69/129 (53%) |
senescence-associated gene 29 | chr5:4181331-4183171 REVERSE LENGTH=292 |
Transcript Sequence (1197 bp)
>PGSC0003DMT400021966 1197 pgsc_dm_v3.4
AAACGCCTAAAATATAAGCTGATAAAAAAACGCCTCTGCCCGGGTTCGAACACGCGACCT
CGCATGTAGTAGGGCGAATTCCTGAACCCCCAACGCCACTGAGCTACGCCTTTGCTGTAT
GTTCAGGGGGTTCAATGGACCCCCAACGCCACTGAGCTACGCCTTTGCTGTATGTTAGGG
AGTTCAATAGTATATATATATACACGTATATTAAAAATTTAATCTTATATATATAGTGTA
ATTTTTCGACGAAGGGGGTTCGGATGAACCCCTTTCGTTCAACATAAATCCGCCCCTGGT
TTATTGTACCATGTTGTTCAACTTGTCAGCTTAATTCCCTTATCTTCAACAAGTGTTACA
TATATAAATTGATTGATGTTTTGAATATGCAAATTAAACAGAGGCAGACGGTGCGGCTTT
TGGTATTATTGATCGGAGGATTGTACACACTCATATTTTTAATCACTTTATTCCCTTTGA
ATGGAGTCCTACGCGTACAAGTTGTTGGTTGGATTTGTGTAACCGTAGCAGTGGGTGTTT
TTGCAGCACCTCTTAGCATCGTGTTTCAAGTGGTTCGAACAAAGAGTGTGGAATTCATGC
CTTTCACCCTCTCTTTCTTTCTTACTTTGAGTGCTATCATGTGGTTTGGTTATGGACTCC
TTCTAAAGGACTTGTGTATTGCACTGCCGAATGTGTTGGGTTTCTTTCTGGGAATGATTC
AAATGTTGTTGTATGGAATTTACCGAAACGCGAAGCCATCGGTAGATTTAGAGAAAAAAG
TGTGTGAGCTCGTAATAAACTCAGAACAGATTCATCCTCTTGATTCCGAGGACATTAATT
CCAACGATGAACAAGGAATTAACACGCCCGGAGTAGTCCCAGTATCGATGGCAAACAACA
ATGAGAATGAGGAGCGACTTGGCGAGCAACTAGCACAAGTGAACTTGCAGCCCCTTCAAA
CACCGGTGCTTGTGGTGTGTGCTGCATGAATTTTACTCTTTTATTATCTTTTAACAGTTT
ATCTGCTTCTACGTTTCATTGCTTTTTTTGTTTATTTATTTGTAATTTATAGTATTATAT
ATTACCTACCTACCTACCACTTTCGGTTTCCATTTCTCTGTGTAAAGAGGAAAAGAGAAA
TATTATGAATCAAAAGGCCGTTAAATATGTATTATTTACATTTCAATCCACGATTTC
