Microarray Probes on PGSC0003DMT400020751
Probe ID | Chip | Probe Sequence |
---|
CUST_29163_PI426222305 |
JHI_St_60k_v1 |
ATTCTATCCATCAAAGCAGTTCAGACAGATGGAAGAAAATACCTAGTGTTTTTGCCTCTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020751
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020751 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G23000.1 |
+1 |
4e-166 |
499 |
256/335 (76%) |
Calcineurin-like metallo-phosphoesterase superfamily protein | chr4:12055241-12060028 FORWARD LENGTH=1015 |
Transcript Sequence (1460 bp)
>PGSC0003DMT400020751 1460 pgsc_dm_v3.4
TTCTGGTCGGATATATTATTCAGGTGCTTACATGCTTATTAACATTTGCAGATTGCATTG
GGCAATATATTGAAATTTAGGAAGAAAAACTGGCAATTTGATGTTATTGGTGGCATGATA
TATTTCATGTTGGTCTTTTCTATGTTTCCACAGTGTCAGCTAGATCACATTTTAAAGGAT
GACACCTTCTCGGGTCGCTTGGGAACCTTCTTTGGCACAGTGTGGGATTTGTTTATGTAT
ATGCTGGGATGCTCATATGTATCAGCAGCTGGTGCTATATTACTTTTAACAATTGCAATA
GTCTTTGTGCCTTCTATGGTGTCTTGGAAAAAGAGACTACTAATTGGGATTCTTCATGTG
TCCGCACACTTGGCTGCTGCCTTGATTCTCATGCTCTTGATGGAATTAGGTGTTGAAATA
TGTATTCGGCATAAATTACTTGCAACTTCAGGTTATCACACTTTATATCAATGGTACCAG
TCTGTGGAGAGTGAGCATTTTCCCGATCCAACTGGCCTTAGGGAACGTATAGAACAATGG
ACATTTGGCCTATATCCAGCATGTATCAAGTATCTCATGTCCGGTTTTGACGTTCCTGAG
GTAATGGCCGTTACCAGGAGTAATATTTGCAAAAATGGGATTGATTCTCTCTCCCGAGGG
GGTGCTGTCATATATTATGCATCAGTCTTCCTTTATTTTTGGGTCTTATCAACTCCGGTG
GTTTCTTTGATACTTGGAAGCTACCTGTACATTTCCATCAATTGGCTTCACATACATTTC
GATGAAGCATTTTCATCACTCCGCATTGCAAATTACAAGTCATTTACACGGTTCCATATC
AATACCAAAGGCGATCTTGAAGTTTTTACCCTTGCAGTCGATAAGGTTCCGAAAGAGTGG
AAATTGGATCCAAATTGGGATGGGGAGTCGAAACAGCCACAAGAACCAAGTTATCTCCAG
AAGTTCCCTAGCAAATGGAGAGCTAAGGCCCCTCAGCAGGACCCTGTAAATACCGTGCGA
ATAATTGATCATTTTGTCATCGAACAGAAAGAATAACCTGATTCAGAACTATCGAACGGG
TAACTTAACCAATGAGTAGTTTGATTACTAACTCATCTAGTGTCATCCTGTACAAATGTT
GTAGGTTTAAAGTACTTAGACAGTAGTTGATATACAAGAAGTTTTTTAGGATAGAAACAG
GATTGTAAAAGACAAATCAAAGATCCATTTGGATCATAGTTTTGTTAAGAAAAGAGAAAT
CCTTGTTAGTCATTATACTTTTCTTTTAATTGAACCACCATTCTCTTTTAGGAATATCTG
TCTATTGTCTAGTAACTTCACATTGTGAGATATTACTAGTATCTTGTGGCTGGTGAAATC
AAGAATCTAAGTACTAGGTAATTCTATCCATCAAAGCAGTTCAGACAGATGGAAGAAAAT
ACCTAGTGTTTTTGCCTCTA