Microarray Probes on PGSC0003DMT400020749
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29017_PI426222305 |
JHI_St_60k_v1 |
ATTCTATCCATCAAAGCAGTTCAGACAGATGGAAGAAAATACCTAGTGTTTTTGCCTCTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020749
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020749 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G23000.1 |
+3 |
0.0 |
1531 |
755/1009 (75%) |
Calcineurin-like metallo-phosphoesterase superfamily protein | chr4:12055241-12060028 FORWARD LENGTH=1015 |
Transcript Sequence (3796 bp)
>PGSC0003DMT400020749 3796 pgsc_dm_v3.4
CAATCTTTTTGTTTTTTTTGGTCACATCACATACACACGACAGTCGTTAGAATTTCACAG
TTACCAGAAATTTTTCCATTTTGGCTTCTGTCTCTGTACCTAAAAGTGTTAAAGACCGGA
CCTTTGAGGGACAGGGGTTGTGGGGTTTTTGTTTTTTTGGTTTCTTGATTAAGGAATATG
CTCTGATTCCTTGCAAGAAAAATGGTTTCTTAAATATGCTGATGTCTGTTCCTAAAATAT
AAAACAGACCCAAATACTCGCTTTTTGCTCTCTTTCATCAATCAGTTGGTTCATGTGAAC
TAGAATTATTCATTGGGAAGAACTTTTATCCAGCAAAGTGGTGGGAATCTAATACTGCTT
GCTGAATGGGGTCTGATAAGCAGTCCAGTGGTCTGCTTGATACTCTAAAAATGGAGACAG
TTAGGACAATCTTAACTCATTCTTATCCTTATCCACATGAACATTCGCGTCATTTGGTCA
TTGCAGTGTTTGTCGGATGCTTATTTTTTATATCATCAGATAACATGCATACACTTATTC
AGAAGTTAGATAGCAATATCAAGTGGTGGTCAATGTATGCCTGTCTGCTTGGATTCTTTT
ACTTCTTTTCATCTCCATTTATAGGGAAGACAATCAAACCAAGTTACTCAAATTTTAGTC
GTTGGTATATATCCTGGATACTTTTGGCTGCTCTATATCATCTTCCCAGTTTTCTATCTA
TGGGAGTAGATCTTAGGATGAACCTGTCTTTGTTTCTGACCTTATTTGTCTCATCCATTT
TGTTTCTTCTCGTTTTCCACGTTATTTTTCTTGGGCTTTGGTATCTTGGCCTTGTTGCTC
GCGTGGCGGGAAAGAGGCCTGAGATCCTGACAATTGTGCAAAATTGTGCTGTATTAAGCA
TAGCCTGCTGTGTGTTTTATAGTCACTGTGGCAACCTTGCTGTAGTAAGGGAAAAGACAT
TTGGTCGGAGGAATTTTGGTTGGTTTTCATTGTGGAACAAGGAAGAGCGGAACACTTGGC
TTACAAAACTCGTAGGCATGACTAAGTTGAAAGACCAAGTCTGCAAATCTTGGTTTGCTC
CAGTTGGGTCAGCCAGTGATTACCCCTTTTTGTCTAAGTGGGTCATCTATGGAGAGTTGA
CTTGCAACGGGTCATGTGCACAATCGTCAAATGAAATTTCTCCGCTATATTCATTGTGGG
CCACTTTTATAGGCCTCTACATTGCAAATTACGTTGTGGAAAGGTCATCAGGATGGGCTC
TTTCACGTCCTTTGTCACTCCAAGAGTTCGAGAAATTGAAGAAAAAGCAAACGAAACCTG
AGTTCTTGGATATGGTTCCTTGGTATTCAGGGACATCTGCTGATTTGTTCAAGACAATGT
TTGACTTACTGGTCTCTGTAACTTTGTTTGTTGGACGCTTTGATATGCGAATGATGCAGG
CGGCTATGAGCAGGGTTGAAGATGGGGCTAAGCAGGAGGATCTTTTGTATGATCAGTTTA
GTGGGAAGGATGGTCTGTGGTTTGACTTCATGGCTGATACAGGAGATGGTGGAAATTCTT
CATACACTGTGGCTCGGCTTCTTGCTCAACCTTCACTCCGGCTCCAAGTCAATGGTTCAA
TGCGTACTCTGCCACGTGGAGACATGCTTCTTATTGGGGGTGACCTTGCATATCCTAATC
CATCATCATTTACATATGAGAAGCGCTTTTTTCGTCCTTTTGAGTATGCTCTTCAGCCTC
CTATGTGGTATAAGGAAGAGCATATTGCTGTAAGTAAGCCTGAATTGCCTCCTGAAGTGG
ATGAACTTAGGCAGTATGATGGACCTCAGTGTTTTGTCATCCCTGGAAACCATGACTGGT
TTGATGGGCTTCAGACGTATATGAGGTACATTTGTCACAAGAGCTGGTTGGGTGGTTGGT
TTATGCCTCAAAAGAAAAGCTATTTTGCGCTTCAGCTCCCCAATAGGTGGTGGGTATTTG
GTCTTGATCTTGCACTCCATTGTGATATTGACGTATACCAATTCAAGTTCTTCTCAGAAT
TAGTGAGAGATAAGGTCGGGAAAAATGATTCTGTGATCATTATGACGCATGAGCCGAACT
GGCTTCTTGATTGGTACTTTAATAATCTGACTGGAAAGAATGTTACCTACTTGATACGCG
ACCATTTGAAAGAAAGGTGTAGACTACGGATTGCTGGAGATGTGCATCACTATATGCGGC
ATTCATATGTTCCATCAAATAAGCCTGTTTATGTCCAGCATTTACTTGTCAATGGTTGTG
GAGGTGCTTTTTTGCACCCTACACATGTCTTCAAGAATTTCAAAGAAATATATGGAACAT
CATACGAGACCAAAGCTGCTTACCCAACTTTTGAAGATTCAAGCAGGATTGCATTGGGCA
ATATATTGAAATTTAGGAAGAAAAACTGGCAATTTGATGTTATTGGTGGCATGATATATT
TCATGTTGGTCTTTTCTATGTTTCCACAGTGTCAGCTAGATCACATTTTAAAGGATGACA
CCTTCTCGGGTCGCTTGGGAACCTTCTTTGGCACAGTGTGGGATTTGTTTATGTATATGC
TGGGATGCTCATATGTATCAGCAGCTGGTGCTATATTACTTTTAACAATTGCAATAGTCT
TTGTGCCTTCTATGGTGTCTTGGAAAAAGAGACTACTAATTGGGATTCTTCATGTGTCCG
CACACTTGGCTGCTGCCTTGATTCTCATGCTCTTGATGGAATTAGGTGTTGAAATATGTA
TTCGGCATAAATTACTTGCAACTTCAGGTTATCACACTTTATATCAATGGTACCAGTCTG
TGGAGAGTGAGCATTTTCCCGATCCAACTGGCCTTAGGGAACGTATAGAACAATGGACAT
TTGGCCTATATCCAGCATGTATCAAGTATCTCATGTCCGGTTTTGACGTTCCTGAGGTAA
TGGCCGTTACCAGGAGTAATATTTGCAAAAATGGGATTGATTCTCTCTCCCGAGGGGGTG
CTGTCATATATTATGCATCAGTCTTCCTTTATTTTTGGGTCTTATCAACTCCGGTGGTTT
CTTTGATACTTGGAAGCTACCTGTACATTTCCATCAATTGGCTTCACATACATTTCGATG
AAGCATTTTCATCACTCCGCATTGCAAATTACAAGTCATTTACACGGTTCCATATCAATA
CCAAAGGCGATCTTGAAGTTTTTACCCTTGCAGTCGATAAGGTTCCGAAAGAGTGGAAAT
TGGATCCAAATTGGGATGGGGAGTCGAAACAGCCACAAGAACCAAGTTATCTCCAGAAGT
TCCCTAGCAAATGGAGAGCTAAGGCCCCTCAGCAGGACCCTGTAAATACCGTGCGAATAA
TTGATCATTTTGTCATCGAACAGAAAGAATAACCTGATTCAGAACTATCGAACGGGTAAC
TTAACCAATGAGTAGTTTGATTACTAACTCATCTAGTGTCATCCTGTACAAATGTTGTAG
GTTTAAAGTACTTAGACAGTAGTTGATATACAAGAAGTTTTTTAGGATAGAAACAGGATT
GTAAAAGACAAATCAAAGATCCATTTGGATCATAGTTTTGTTAAGAAAAGAGAAATCCTT
GTTAGTCATTATACTTTTCTTTTAATTGAACCACCATTCTCTTTTAGGAATATCTGTCTA
TTGTCTAGTAACTTCACATTGTGAGATATTACTAGTATCTTGTGGCTGGTGAAATCAAGA
ATCTAAGTACTAGGTAATTCTATCCATCAAAGCAGTTCAGACAGATGGAAGAAAATACCT
AGTGTTTTTGCCTCTA
