Microarray Probes on PGSC0003DMT400020671
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29143_PI426222305 |
JHI_St_60k_v1 |
CCCTATAACCTGCATTTTAATCTCACTATGTACTTCATCTAGTCAGGCCATCCATGTTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020671
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020671 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G45249.3 |
+3 |
1e-94 |
305 |
228/426 (54%) |
abscisic acid responsive elements-binding factor 2 | chr1:17165420-17167415 REVERSE LENGTH=427 |
Transcript Sequence (2404 bp)
>PGSC0003DMT400020671 2404 pgsc_dm_v3.4
AAAAAAAGTCCTAATTAGCCACTTGGCACTTTCAAGAACCACTCAAAGCCAAAGAAGAAA
CGTCTAGCAGTGTACAAGTGAAAGCCAAAAAAAGGAGAAAAAGAAAAAAAAGGTAAACAG
GAAAACAAACTGTTTCTTGTGTTCCCATGTCAAAAAAGAAGTTTTTTTTTTTTTGGTTGG
TGTTTCCTTAAATATTATCTATTTGTGGATAAGTAGTCAAATGATTAGTTTTCTTGGTTT
CTTATCTTCAAAGTTTTGATCTTTGAGCTTTGTGATTTTTTTAGTTGAGTTTTGTGTATT
TGAAGGTCAAAAGGTGAGTTCTTTATTGGATTGGTGGGTGGGGGAATTTGTGTTTTGGGG
GTTTTTGGTGTGAACTGAAAATGCAGTAAAGTTAGTTGAATGAAGTGAATTTCATATAGA
ATTTGTTTTTGATGATTTTATTGATAAGGGGTTGGTGAGTTTTAGCTTTAAATTGATTTT
TCATCTCTTTCCAGGTATATTTTGCTTTTAATTAACTGTGTGTTTGTAAATAGATGTACA
TTTATTTATGTGAGGGGTTGAACAGTATGATAGGGAAAAAGGTTTAAAGGAAAGTGAATT
AACTTGTTGATCTGATATGTAGGTTTTGTGATTCTTGAATAACAGAGGTGAGGTTTGAAG
GAGGATTAGGTGAGGACTGAGGAGTTTTTAGTGAAATGGGGAGTAATTATCATTTCAAGA
ACTTTGGTAATGAGCCACCAGGTGAGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGGAAGC
AGCTGGGGAACTTTGGATTGCCGCGGCAGTCATCTATCTATTCGTTGACATTTGATGAGT
TTCTTAGCTCAACAGGAGGGAGTGGTAAGGATTTTGGGTCAATGAACATGGATGAGTTGT
TAAAGAACATATGGAATGCTGAGGAGAATCAAACAATAGGAGGGCCTGGGATTAATGGGC
AAGAGGTTGGTGTTCCACGTGGGCATTTGCAGAGGCAAGGATCTTTGACTTTACCTAGGA
CACTGAGTCATAAGACTGTAGATGAAGTTTGGAGAGATATGTCAAAGGAGCATGGTGGTG
GGAAGGATGGAAATAGTGTTGGAGTGCCACCAAATATACCTCAGACTCAGAGGCAACAGA
CTTTTGGGGAGATAACACTTGAGGAATTCCTAGTTAGAGCTGGAGTTGTCAGAGAAGATG
CACTGTTTGCTGCGAAATCGAATAATACTGGAGGAATCTTTGGTGATTTGTCCTATGCTG
GGAATAATACAGGGCTTGCATTTGGATATCAACAAGCTAATAATAGGAACACAGGTTTAA
TGGCTGGTAGTATCCCTAACAAGAATGGTGAAACTGTTATCCAGACTGCTAATTTGCCAC
TGAATGTGAATGGGGTCAGATCCACACAACAACAGCTAAGACCACAGCAACTGCAACAGA
ACCATCAACCACAGCAACAGCAGCCACAGCAGCAACCGATTTTCCCTAAGCAGCCTGCTT
TGCCCTATGGTGCTCCTATGGCTATCCCAAATAGTGGGCAGTTGGGCAGTCCGGGAATGA
GGGTAGGGATGGTTGGTATCCCTGATCCAGCACTCAACTCTAATTTCATTCAAGGCACTG
CTCTAATGGGTGGAGGAATGAATATGGTAGGTTTAGGAGCCAGTGGGGTTACTGTTGCAA
CAGCATCTCCAGGTGTTTCATCATCAGATGGACTTGGGAAAAGCAATGGAGATACACCTT
CTGTATCTCCAGTTCCTTATGTGTTTAATGGTGGTTTAAGAGGCAGGAAATACAGTACTG
TGGAGAAGGTTGTTGAAAGGAGGCAGAGGAGAATGATAAAAAATAGAGAGTCAGCTGCTA
GATCAAGAGCTCGAAAGCAGGCCTATACTATGGAGCTAGAAGCAGAAGTCGCAAAACTAA
AAGAAGAAAACGATGAACTTCAAAAGAAACAGGAAGAAATGTTGGAAATGCAGAAGAATC
AGGTACATGAAGTTCTGTTTCCTCTTATTTTCCCCTCATGCTGCATAGTTTTGCTTCCAT
AGACATAGTTCAATAATTCAGCACACACATGCTAGAGGAAAATGTACTATTTCATCTTGG
AACCTGCCTTTATCCATAAGTATGGTATAATCGGTAACTATCTTTTAGATCATCCATCCA
ATCACCATGCCTGTTATTTTAGCCCTATGAGATTGAATAAACACTTCTCAGCATTTTTCC
TCGCTGACTGGAAAAAAACAAAATGCTGTTCTTTGCTACTGAAACTACTCTCTGAATCAA
CCATCTCCAGTCATTGTTGGTTAAAGTGGCTAAGAAGGTACCTTCTTTTAGCACACTATT
CCATCCCTATAACCTGCATTTTAATCTCACTATGTACTTCATCTAGTCAGGCCATCCATG
TTAT
